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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CASP9-PDR90-011303
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:171


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss6310809 CASP9-006244 -/A 168 rs4646001 0 1 15519983 NT_032977.10 14933995
ss6310808 CASP9-006144 C/T 86 rs4646000 0 1 15520083 NT_032977.10 14934095
ss6310806 CASP9-006033 C/T 170 rs4645998 0 1 15520194 NT_032977.10 14934206
ss6310805 CASP9-004026 A/G 168 rs933704 1 1 15522201 NT_032977.10 14936213
ss6310804 CASP9-003980 G/T 170 rs4645997 0 1 15522247 NT_032977.10 14936259
ss6310803 CASP9-003833 C/T 172 rs4645996 0 1 15522394 NT_032977.10 14936406
ss6310802 CASP9-003719 C/G 174 rs4645995 0 1 15522508 NT_032977.10 14936520
ss6310801 CASP9-003541 C/T 176 rs4645994 0 1 15522686 NT_032977.10 14936698
ss6310800 CASP9-003503 C/T 176 rs4645993 0 1 15522724 NT_032977.10 14936736
ss6310799 CASP9-003078 A/G 174 rs4233536 0 1 15523149 NT_032977.10 14937161
ss6310798 CASP9-003022 A/T 174 rs4233537 0 1 15523205 NT_032977.10 14937217
ss6310797 CASP9-002980 A/C 174 rs4645992 0 1 15523247 NT_032977.10 14937259
ss6310796 CASP9-002974 G/T 174 rs4645991 0 1 15523253 NT_032977.10 14937265
ss6310795 CASP9-002952 C/T 174 rs4645990 0 1 15523275 NT_032977.10 14937287
ss6310794 CASP9-002867 A/C 172 rs4233538 0 1 15523360 NT_032977.10 14937372
ss6310793 CASP9-002379 C/T 164 rs4645989 0 1 15523848 NT_032977.10 14937860
ss6310792 CASP9-002370 A/G 158 rs4645988 0 1 15523857 NT_032977.10 14937869
ss6310791 CASP9-002367 A/G 158 rs4645987 0 1 15523860 NT_032977.10 14937872
ss6310790 CASP9-002332 -/TCAG 160 rs4645986 0 1 15523892 NT_032977.10 14937904
ss6310789 CASP9-002239 C/T 100 rs4645985 0 1 15523988 NT_032977.10 14938000
ss6310788 CASP9-002162 -/CGCCCCC 102 rs4645984 0 1 15524058 NT_032977.10 14938070
ss6310787 CASP9-002112 C/T 122 rs4645983 0 1 15524108 NT_032977.10 14938120
ss6310786 CASP9-002102 C/T 122 rs1052571 0 1 15524118 NT_032977.10 14938130
ss6310785 CASP9-001632 -/CGTGAGGTCAGTGCGGGGA 84 rs4645982 0 1 15524569 NT_032977.10 14938581
ss6310784 CASP9-001213 C/T 152 rs4645981 0 1 15524988 NT_032977.10 14939000
ss6310783 CASP9-001020 G/T 160 rs4645980 0 1 15525181 NT_032977.10 14939193
ss6310782 CASP9-000990 C/G 166 rs4645979 0 1 15525211 NT_032977.10 14939223
ss6310781 CASP9-000662 A/G 176 rs4645978 0 1 15525539 NT_032977.10 14939551
ss6310780 CASP9-000530 A/T 172 rs4645977 0 1 15525671 NT_032977.10 14939683
ss6310807 CASP9-006095 -/CT 170 rs869167350 1 N.D. N.D.
30 of 171 subsnp's starting at ss6310809. ss# starting at ss

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