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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CASP3-PDR90-012203
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:126


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss6313454 CASP3-007815 C/G 162 rs2310103 1 4 184642073 NT_016354.20 125720692
ss6313453 CASP3-007606 C/T 178 rs4647626 0 4 184642282 NT_016354.20 125720901
ss6313452 CASP3-007594 A/G 178 rs4647625 0 4 184642294 NT_016354.20 125720913
ss6313451 CASP3-007573 C/T 178 rs4647624 0 4 184642315 NT_016354.20 125720934
ss6313450 CASP3-007548 -/C 180 rs4647623 0 4 184642340 NT_016354.20 125720959
ss6313449 CASP3-007423 C/T 180 rs4647622 0 4 184642465 NT_016354.20 125721084
ss6313448 CASP3-007399 A/G 180 rs4647621 0 4 184642489 NT_016354.20 125721108
ss6313447 CASP3-007327 C/G 180 rs4647620 0 4 184642561 NT_016354.20 125721180
ss6313446 CASP3-007289 A/G 180 rs4647619 0 4 184642599 NT_016354.20 125721218
ss6313445 CASP3-004434 C/G 172 rs4647618 0 4 184645454 NT_016354.20 125724073
ss6313444 CASP3-004261 A/G 168 rs4647617 0 4 184645627 NT_016354.20 125724246
ss6313443 CASP3-004211 A/G 168 rs4647616 0 4 184645677 NT_016354.20 125724296
ss6313442 CASP3-003794 C/T 170 rs4647615 0 4 184646094 NT_016354.20 125724713
ss6313441 CASP3-003539 A/G 172 rs4647614 0 4 184646349 NT_016354.20 125724968
ss6313440 CASP3-003381 C/T 178 rs4647613 0 4 184646507 NT_016354.20 125725126
ss6313439 CASP3-003346 A/G 178 rs4647612 0 4 184646542 NT_016354.20 125725161
ss6313438 CASP3-003139 C/G 178 rs4647611 0 4 184646749 NT_016354.20 125725368
ss6313437 CASP3-003111 A/G 178 rs4647610 0 4 184646777 NT_016354.20 125725396
ss6313436 CASP3-003080 C/T 178 rs4647609 0 4 184646808 NT_016354.20 125725427
ss6313435 CASP3-002929 C/G 178 rs2720378 1 4 184646959 NT_016354.20 125725578
ss6313434 CASP3-002805 A/G 178 rs4647608 0 4 184647083 NT_016354.20 125725702
ss6313433 CASP3-002739 A/C 180 rs4647607 0 4 184647149 NT_016354.20 125725768
ss6313432 CASP3-002191 A/G 180 rs4647606 0 4 184647697 NT_016354.20 125726316
ss6313431 CASP3-002018 C/T 180 rs4647605 0 4 184647870 NT_016354.20 125726489
ss6313430 CASP3-001865 C/T 180 rs4647604 0 4 184648023 NT_016354.20 125726642
ss6313429 CASP3-001770 C/T 180 rs2720379 1 4 184648118 NT_016354.20 125726737
ss6313428 CASP3-001312 A/G 172 rs4647603 0 4 184648576 NT_016354.20 125727195
ss6313427 CASP3-001241 A/C 174 rs4647602 0 4 184648647 NT_016354.20 125727266
ss6313426 CASP3-001010 G/T 100 rs4647601 0 4 184648878 NT_016354.20 125727497
ss6313425 CASP3-000142 A/G 158 rs4647600 0 4 184649745 NT_016354.20 125728364
30 of 126 subsnp's starting at ss6313454. ss# starting at ss

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