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View SNP Submission Batch
Submitter Handle:PGA-UW-FHCRC
Submitter Batch ID:TRAF6-AFRICAN-031103
Submitter Method ID:METHOD-E
Citation:SeattleSNPs. NHLBI Program for Genomic Applications HL66682
Population:PGA-AFRICAN-PANEL
Comment:THESE SNPS WERE GENERATED AS PART OF THE NHLBI PROGRAM FOR GENOMIC APPLICATIONS (PGA) TO DEVELOP GENOMIC RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE PGA.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:31


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss7985595 TRAF6-025725 A/G 44 rs5030486 0 11 36487596 NT_009237.19 36427596
ss7985594 TRAF6-025682 A/C 44 rs5030485 0 11 36487639 NT_009237.19 36427639
ss7985591 TRAF6-024845 A/G 46 rs5030482 0 11 36488476 NT_009237.19 36428476
ss7985588 TRAF6-024324 C/T 48 rs1046864 0 11 36488997 NT_009237.19 36428997
ss7985584 TRAF6-023581 C/T 48 rs5030477 0 11 36489740 NT_009237.19 36429740
ss7985581 TRAF6-022168 -/A 48 rs5030474 0 11 36491152 NT_009237.19 36431152
ss7985579 TRAF6-021084 A/G 48 rs5030472 0 11 36492236 NT_009237.19 36432236
ss7985578 TRAF6-020580 A/G 42 rs2303439 1 11 36492740 NT_009237.19 36432740
ss7985576 TRAF6-019424 C/T 48 rs5030470 0 11 36493896 NT_009237.19 36433896
ss7985573 TRAF6-018686 -/AT 42 rs5030467 0 11 36494630 NT_009237.19 36434630
ss7985565 TRAF6-017551 A/C 48 rs5030459 0 11 36495765 NT_009237.19 36435765
ss7985564 TRAF6-016940 C/T 48 rs331459 0 11 36496376 NT_009237.19 36436376
ss7985561 TRAF6-016041 -/T 42 rs3830511 1 11 36497274 NT_009237.19 36437274
ss7985559 TRAF6-015240 A/G 48 rs5030454 0 11 36498074 NT_009237.19 36438074
ss7985549 TRAF6-012604 A/G 48 rs5030445 0 11 36500710 NT_009237.19 36440710
ss7985548 TRAF6-011252 A/G 48 rs331457 0 11 36502062 NT_009237.19 36442062
ss7985545 TRAF6-010397 A/G 42 rs5030442 0 11 36502917 NT_009237.19 36442917
ss7985540 TRAF6-010109 C/T 46 rs5030437 0 11 36503205 NT_009237.19 36443205
ss7985539 TRAF6-009957 A/C 46 rs502243 0 11 36503358 NT_009237.19 36443358
ss7985534 TRAF6-009572 A/G 48 rs540386 1 11 36503743 NT_009237.19 36443743
ss7985528 TRAF6-008941 -/CTGT 48 rs5030427 0 11 36504370 NT_009237.19 36444370
ss7985525 TRAF6-008335 G/T 46 rs554949 0 11 36504976 NT_009237.19 36444976
ss7985524 TRAF6-008015 C/T 42 rs552140 0 11 36505296 NT_009237.19 36445296
ss7985519 TRAF6-004214 C/G 44 rs4755453 1 11 36509094 NT_009237.19 36449094
ss7985518 TRAF6-004115 C/G 42 rs5030419 0 11 36509193 NT_009237.19 36449193
ss7985515 TRAF6-002370 A/C 40 rs5030416 0 11 36510938 NT_009237.19 36450938
ss7985512 TRAF6-001893 A/G 44 rs5030414 0 11 36511415 NT_009237.19 36451415
ss7985509 TRAF6-001105 C/T 38 rs5030411 0 11 36512203 NT_009237.19 36452203
ss7985507 TRAF6-000973 C/T 38 rs5030409 0 11 36512335 NT_009237.19 36452335
ss7985501 TRAF6-000431 G/T 46 rs5030403 0 11 36512877 NT_009237.19 36452877
30 of 31 subsnp's starting at ss7985595. ss# starting at ss

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