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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CASP6-PDR90-031703
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:113


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss7985651 CASP6-003751 A/G 168 rs5030537 0 4 109700854 NT_016354.20 50779473
ss7985650 CASP6-003661 C/T 178 rs5030536 0 4 109700944 NT_016354.20 50779563
ss7985649 CASP6-003634 A/G 176 rs5030535 0 4 109700971 NT_016354.20 50779590
ss7985648 CASP6-003604 A/G 178 rs5030534 0 4 109701001 NT_016354.20 50779620
ss7985647 CASP6-003577 C/T 178 rs5030533 0 4 109701028 NT_016354.20 50779647
ss7985646 CASP6-003408 C/T 176 rs5030532 0 4 109701197 NT_016354.20 50779816
ss7985645 CASP6-003392 -/TA 174 rs5030531 0 4 109701211 NT_016354.20 50779830
ss7985644 CASP6-003114 A/G 158 rs5030530 0 4 109701489 NT_016354.20 50780108
ss7985643 CASP6-002965 C/G 162 rs5030529 0 4 109701638 NT_016354.20 50780257
ss7985642 CASP6-002857 A/T 168 rs5030528 0 4 109701746 NT_016354.20 50780365
ss7985641 CASP6-002849 A/G 168 rs3181187 0 4 109701754 NT_016354.20 50780373
ss7985640 CASP6-002793 C/T 168 rs5030527 0 4 109701810 NT_016354.20 50780429
ss7985639 CASP6-002773 C/T 170 rs5030526 0 4 109701830 NT_016354.20 50780449
ss7985638 CASP6-002761 A/G 170 rs5030525 0 4 109701842 NT_016354.20 50780461
ss7985637 CASP6-002681 A/C 170 rs5030524 0 4 109701922 NT_016354.20 50780541
ss7985636 CASP6-002461 C/T 178 rs5030523 0 4 109702142 NT_016354.20 50780761
ss7985635 CASP6-002149 A/G 164 rs2237056 1 4 109702454 NT_016354.20 50781073
ss7985634 CASP6-002059 A/G 168 rs5030522 0 4 109702544 NT_016354.20 50781163
ss7985633 CASP6-001738 A/G 112 rs3181340 0 4 109702865 NT_016354.20 50781484
ss7985632 CASP6-001632 A/G 164 rs5030521 0 4 109702971 NT_016354.20 50781590
ss7985631 CASP6-001312 C/G 168 rs5030520 0 4 109703291 NT_016354.20 50781910
ss7985630 CASP6-001269 A/G 164 rs5030519 0 4 109703334 NT_016354.20 50781953
ss7985629 CASP6-000917 C/T 164 rs5030518 0 4 109703686 NT_016354.20 50782305
ss7985628 CASP6-000894 A/C 164 rs5030517 0 4 109703709 NT_016354.20 50782328
ss7985627 CASP6-000838 C/G 164 rs5030516 0 4 109703765 NT_016354.20 50782384
ss7985626 CASP6-000638 A/G 158 rs5030515 0 4 109703965 NT_016354.20 50782584
ss7985625 CASP6-000561 C/T 158 rs5030514 0 4 109704042 NT_016354.20 50782661
ss7985624 CASP6-000539 -/TA 152 rs5030513 0 4 109704063 NT_016354.20 50782682
ss7985623 CASP6-000224 C/T 154 rs5030512 0 4 109704379 NT_016354.20 50782998
ss7985622 CASP6-000059 A/G 152 rs5030511 0 4 109704544 NT_016354.20 50783163
30 of 113 subsnp's starting at ss7985651. ss# starting at ss

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