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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR20_NA10470_200306
Submitter Method ID:CHR20_NA10470_200306
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:11704


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss11100111 chr1.NT_028054.12_2341833 C/T 2 rs7339868 0 1 8154714 NT_032977.10 7568726
ss11100125 chr1.NT_004391.15_613974 A/G 2 rs7339882 0 1 23947186 NT_032977.10 23361198
ss11100114 chr1.NT_004511.15_834271 A/G 2 rs7339871 0 1 30579840 NT_032977.10 29993852
ss11100116 chr1.NT_004511.15_911296 C/T 2 rs7339873 0 1 30656865 NT_032977.10 30070877
ss11100118 chr1.NT_004511.15_6305049 C/T 2 rs7339875 0 1 36057897 NT_032977.10 35471909
ss11100122 chr1.NT_004511.15_6305167 C/T 2 rs7339879 0 1 36058015 NT_032977.10 35472027
ss11100128 chr1.NT_004511.15_6305374 C/T 2 rs7339885 0 1 36058222 NT_032977.10 35472234
ss11100113 chr1.NT_077386.2_185309 A/G 3 rs7339870 0 1 38112616 NT_032977.10 37526628
ss11100124 chr1.NT_077386.2_4172867 A/G 2 rs7339881 0 1 42100175 NT_032977.10 41514187
ss11100135 chr1.NT_004464.15_2045701 A/C 2 rs2817850 0 1 71134727 NT_032977.10 70548739
ss11100117 chr1.NT_004464.15_4573057 C/T 2 rs7339874 0 1 73662083 NT_032977.10 73076095
ss11100107 chr1.NT_077955.1_56634 C/T 2 rs7339866 0 1 77835282 NT_032977.10 77249294
ss11100127 chr1.NT_004483.15_979170 C/T 3 rs7339884 0 1 78844414 NT_032977.10 78258426
ss11100133 chr1.NT_021979.15_223528 C/T 2 rs7339890 0 1 93432067 NT_032977.10 92846079
ss11100110 chr1.NT_077991.1_28014 C/T 2 rs2646713 1 1 104410324 NT_032977.10 103824336
ss11100109 chr1.NT_019273.15_4845814 A/G 2 rs7339867 0 1 113867388 NT_032977.10 113281400
ss11100120 chr1.NT_004668.15_14542046 A/G 2 rs7339877 0 1 168202249 NT_004487.20 25017662
ss11100112 chr1.NT_004487.15_12702127 A/G 2 rs7339869 0 1 183939956 NT_004487.20 40755369
ss11100115 chr1.NT_004487.15_14398122 A/G 2 rs7339872 0 1 185635953 NT_004487.20 42451366
ss11100119 chr1.NT_077938.1_380002 A/G 2 rs7339876 0 1 221881192 NT_004487.20 78696605
ss11100121 chr1.NT_004525.15_1888807 C/T 2 rs7339878 0 1 225968807 NT_167186.2 2359872
ss11100131 chr1.NT_077930.1_24424 C/T 2 rs1818236 1 N.D. N.D.
ss11100134 chr1.NT_077930.1_6493 A/G 2 rs4112421 0 N.D. N.D.
ss11100123 chr1.NT_077387.2_169461 C/T 2 rs4126164 1 N.D. N.D.
ss11100108 chr1.NT_077930.1_46023 A/T 2 rs4975471 0 N.D. N.D.
ss11100126 chr1.NT_077930.1_50642 A/G 2 rs7339883 0 N.D. N.D.
ss11100129 chr1.NT_022052.2_52390 C/T 3 rs7339886 0 N.D. N.D.
ss11100130 chr1.NT_022052.2_52407 C/T 2 rs7339887 0 N.D. N.D.
ss11100132 chr1.NT_077930.1_24580 C/T 2 rs747757511 0 N.D. N.D.
ss11100136 chr1.NT_077930.1_24692 C/T 2 rs761881582 0 N.D. N.D.
30 of 11704 subsnp's starting at ss11100111. ss# starting at ss