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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR20_NA07340_200306
Submitter Method ID:CHR20_NA07340_200306
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:7074


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss11111821 chr1.NT_034471.3_44656 A/G 2 rs6421779 0 1 630644 NT_032977.10 44656
ss11111822 chr1.NT_034471.3_44680 A/G 2 rs6421780 0 1 630668 NT_032977.10 44680
ss11111818 chr1.NT_077916.1_13820 C/T 2 rs7349071 0 1 2106719 NT_032977.10 1520731
ss11111840 chr1.NT_077916.1_13840 A/G 2 rs7349084 0 1 2106739 NT_032977.10 1520751
ss11111830 chr1.NT_004610.15_1315058 C/G 2 rs6426617 0 1 20185315 NT_032977.10 19599327
ss11111832 chr1.NT_004610.15_1697433 A/G 2 rs6426641 0 1 20567690 NT_032977.10 19981702
ss11111816 chr1.NT_077386.2_3429774 C/T 2 rs7349069 0 1 41357081 NT_032977.10 40771093
ss11111825 chr1.NT_032977.5_10517087 A/G 2 rs6587785 0 1 57602503 NT_032977.10 57016515
ss11111826 chr1.NT_032977.5_11598644 G/T 2 rs6587837 0 1 58684061 NT_032977.10 58098073
ss11111835 chr1.NT_032977.5_17290438 C/T 2 rs7349080 0 1 64375844 NT_032977.10 63789856
ss11111838 chr1.NT_032977.5_17290725 C/T 2 rs7349082 0 1 64376131 NT_032977.10 63790143
ss11111831 chr1.NT_004464.15_1772101 C/T 2 rs6424406 0 1 70861127 NT_032977.10 70275139
ss11111820 chr1.NT_004464.15_3116132 C/T 2 rs7349073 0 1 72205158 NT_032977.10 71619170
ss11111817 chr1.NT_004483.15_3144760 A/G 2 rs7349070 0 1 81010004 NT_032977.10 80424016
ss11111813 chr1.NT_004686.15_1662357 C/T 2 rs6428516 0 1 89322045 NT_032977.10 88736057
ss11111812 chr1.NT_077927.1_1509738 C/T 2 rs7349066 0 1 92844359 NT_032977.10 92258371
ss11111824 chr1.NT_029860.10_1110741 G/T 2 rs6582942 0 1 105570998 NT_032977.10 104985010
ss11111814 chr1.NT_004668.15_1866349 G/T 2 rs7349067 0 1 155444157 NT_004487.20 12259570
ss11111833 chr1.NT_004668.15_3428459 C/T 2 rs7349078 0 1 157006266 NT_004487.20 13821679
ss11111823 chr1.NT_004668.15_3658222 C/T 3 rs7349074 0 1 157236031 NT_004487.20 14051444
ss11111827 chr1.NT_004487.15_1632521 C/T 2 rs7349075 0 1 172809823 NT_004487.20 29625236
ss11111839 chr1.NT_004487.15_4829265 A/G 2 rs7349083 0 1 176006482 NT_004487.20 32821895
ss11111834 chr1.NT_004671.15_2622300 A/G 2 rs7349079 0 1 191298184 NT_004487.20 48113597
ss11111828 chr1.NT_004671.15_3196336 G/T 2 rs7349076 0 1 191872220 NT_004487.20 48687633
ss11111811 chr1.NT_004671.15_3335086 A/G 2 rs7349065 0 1 192010970 NT_004487.20 48826383
ss11111829 chr1.NT_021877.15_411673 C/T 2 rs1800891 1 1 206775221 NT_004487.20 63590634
ss11111819 chr1.NT_004836.14_7674365 A/T 2 rs7349072 0 1 242862129 NT_167186.2 19253194
ss11111836 chr1.NT_077930.1_18826 C/T 2 rs6422549 0 N.D. N.D.
ss11111815 chr1.NT_077930.1_19142 A/C 2 rs7349068 0 N.D. N.D.
ss11111837 chr1.NT_077930.1_18851 G/T 2 rs7349081 0 N.D. N.D.
30 of 7074 subsnp's starting at ss11111821. ss# starting at ss