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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR20_NA11321_200306
Submitter Method ID:CHR20_NA11321_200306
Citation:A linkage disequilibrium map of human chromosome 20SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:8028


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss12568714 chr1.NT_034471.3_47323 C/T 3 rs8179256 0 1 633311 NT_032977.10 47323
ss12568725 chr1.NT_004391.15_573659 A/G 2 rs6658495 0 1 23906822 NT_032977.10 23320834
ss12568719 chr1.NT_037485.3_2218999 A/G 2 rs8179260 0 1 27781279 NT_032977.10 27195291
ss12568730 chr1.NT_004538.14_938024 A/C 2 rs8179268 0 1 29418556 NT_032977.10 28832568
ss12568738 chr1.NT_032977.5_742273 A/G 2 rs8179276 0 1 47826865 NT_032977.10 47240877
ss12568722 chr1.NT_032977.5_9708208 G/T 2 rs8179263 0 1 56793623 NT_032977.10 56207635
ss12568739 chr1.NT_032977.5_18065561 C/T 3 rs6660166 0 1 65150967 NT_032977.10 64564979
ss12568724 chr1.NT_004464.15_3607709 C/T 2 rs8179265 0 1 72696735 NT_032977.10 72110747
ss12568734 chr1.NT_077955.1_30969 C/T 2 rs8179272 0 1 77809617 NT_032977.10 77223629
ss12568727 chr1.NT_004483.15_2278482 C/G 2 rs4372206 0 1 80143726 NT_032977.10 79557738
ss12568735 chr1.NT_028050.12_1010299 C/G 2 rs8179273 0 1 99671072 NT_032977.10 99085084
ss12568728 chr1.NT_019273.15_2134390 C/T 2 rs8179267 0 1 111153954 NT_032977.10 110567966
ss12568723 chr1.NT_019273.15_2703346 G/T 2 rs8179264 0 1 111722910 NT_032977.10 111136922
ss12568741 chr1.NT_019273.15_5554672 A/C 2 rs8179277 0 1 114576247 NT_032977.10 113990259
ss12568733 chr1.NT_004668.15_1989139 A/G 2 rs8179271 0 1 155566947 NT_004487.20 12382360
ss12568736 chr1.NT_004668.15_8571776 A/G 2 rs8179274 0 1 162231427 NT_004487.20 19046840
ss12568712 chr1.NT_004668.15_12712721 A/G 2 rs8179254 0 1 166372925 NT_004487.20 23188338
ss12568717 chr1.NT_004487.15_4814122 C/T 2 rs6425370 0 1 175991339 NT_004487.20 32806752
ss12568732 chr1.NT_004487.15_4871812 A/G 2 rs8179270 0 1 176049029 NT_004487.20 32864442
ss12568720 chr1.NT_004487.15_6249606 C/G 2 rs8179261 0 1 177426823 NT_004487.20 34242236
ss12568718 chr1.NT_004487.15_10845313 C/G 2 rs8179259 0 1 182083141 NT_004487.20 38898554
ss12568721 chr1.NT_004487.15_11766223 C/T 2 rs8179262 0 1 183004051 NT_004487.20 39819464
ss12568731 chr1.NT_004671.15_9892296 C/T 2 rs8179269 0 1 198568182 NT_004487.20 55383595
ss12568740 chr1.NT_004836.14_6553311 A/G 2 rs6660705 0 1 241646650 NT_167186.2 18037715
ss12568726 chr1.NT_004836.14_8935501 G/T 2 rs8179266 0 1 244123915 NT_167186.2 20514980
ss12568713 chr1.NT_004836.14_8935519 A/G 2 rs8179255 0 1 244123933 NT_167186.2 20514998
ss12568729 chr1.NT_031730.8_605680 C/T 2 rs6659039 0 1 248302387 NT_167186.2 24693452
ss12568716 chr1.NT_077930.1_2073 C/G 2 rs8179258 0 21 8846901 NT_113954.1 90186
ss12568737 chr1.NT_077944.1_170601 A/C 2 rs878998145 0 4 49646517 NT_037645.2 159593
ss12568715 chr1.NT_077930.1_2049 A/G 2 N.D. N.D.
30 of 8028 subsnp's starting at ss12568714. ss# starting at ss