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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:GSR-PDR90-071503
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:206


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss12584689 GSR-002578 G/T 164 rs8190897 0 8 30726186 NT_167187.2 18441841
ss12584688 GSR-002567 C/T 164 rs8190896 0 8 30726197 NT_167187.2 18441852
ss12584687 GSR-002515 C/T 166 rs8190895 0 8 30726249 NT_167187.2 18441904
ss12584686 GSR-002472 A/C 168 rs8190894 0 8 30726292 NT_167187.2 18441947
ss12584685 GSR-002377 A/G 180 rs8190893 0 8 30726387 NT_167187.2 18442042
ss12584684 GSR-002293 A/G 178 rs8190892 0 8 30726471 NT_167187.2 18442126
ss12584683 GSR-002217 A/G 178 rs8190891 0 8 30726547 NT_167187.2 18442202
ss12584682 GSR-002210 A/C 178 rs8190890 0 8 30726554 NT_167187.2 18442209
ss12584681 GSR-002132 C/T 176 rs8190889 0 8 30726632 NT_167187.2 18442287
ss12584680 GSR-002051 C/G 176 rs8190888 0 8 30726713 NT_167187.2 18442368
ss12584679 GSR-001627 A/G 176 rs8190887 0 8 30727137 NT_167187.2 18442792
ss12584678 GSR-001527 A/G 176 rs8190886 0 8 30727237 NT_167187.2 18442892
ss12584677 GSR-001402 A/G 170 rs8190885 0 8 30727362 NT_167187.2 18443017
ss12584676 GSR-001399 A/G 170 rs2280857 0 8 30727365 NT_167187.2 18443020
ss12584675 GSR-001358 C/T 164 rs2251780 0 8 30727406 NT_167187.2 18443061
ss12584674 GSR-001337 C/G 162 rs2280856 0 8 30727427 NT_167187.2 18443082
ss12584673 GSR-001189 C/T 176 rs2280855 0 8 30727575 NT_167187.2 18443230
ss12584672 GSR-001117 C/T 176 rs2280854 0 8 30727647 NT_167187.2 18443302
ss12584671 GSR-001053 A/G 176 rs8190884 0 8 30727711 NT_167187.2 18443366
ss12584670 GSR-000894 C/T 178 rs8190883 0 8 30727870 NT_167187.2 18443525
ss12584669 GSR-000878 A/G 178 rs8190882 0 8 30727886 NT_167187.2 18443541
ss12584668 GSR-000877 C/T 180 rs8190881 0 8 30727887 NT_167187.2 18443542
ss12584667 GSR-000684 A/C 178 rs8190880 0 8 30728080 NT_167187.2 18443735
ss12584666 GSR-000666 A/G 176 rs2280853 0 8 30728098 NT_167187.2 18443753
ss12584665 GSR-000659 A/C 176 rs2280852 0 8 30728105 NT_167187.2 18443760
ss12584664 GSR-000631 A/G 176 rs8190879 0 8 30728133 NT_167187.2 18443788
ss12584663 GSR-000611 C/G 176 rs8190878 0 8 30728153 NT_167187.2 18443808
ss12584662 GSR-000580 -/G 176 rs8190877 0 8 30728183 NT_167187.2 18443838
ss12584661 GSR-000542 A/C 174 rs1002149 1 8 30728221 NT_167187.2 18443876
ss12584660 GSR-000541 C/G 176 rs8190876 0 8 30728222 NT_167187.2 18443877
30 of 206 subsnp's starting at ss12584689. ss# starting at ss

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