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View SNP Submission Batch
Submitter Handle:SC_JCM
Submitter Batch ID:TSC_200310
Submitter Method ID:TSC_200310
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:37381


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss11196711 chr1.NT_077970.1_77603 A/G 2 rs2226739 0 1 115542385 NT_032977.10 114956397
ss11196873 chr1.NT_077933.1_135724 A/G 2 rs4649707 1 1 120408811 NT_032977.10 119822823
ss11197364 chr1.NT_077949.1_171350 C/G 2 rs61810913 0 1 120442935 NT_032977.10 119856947
ss11197393 chr1.NT_077949.1_171420 C/G 2 rs201489095 0 1 120443005 NT_032977.10 119857017
ss11196496 chr1.NT_077949.1_127786 C/T 2 rs4997150 1 1 120491504 NT_032977.10 119905516
ss11196450 chr1.NT_077949.1_127596 C/T 2 rs1699757 0 1 120491694 NT_032977.10 119905706
ss11197049 chr1.NT_034403.3_295356 A/G 3 rs3844567 1 1 121021990 NT_032977.10 120436002
ss11196421 chr1.NT_077949.1_127461 G/T 2 rs2258448 1 1 149030031 NT_004487.20 5845444
ss11197334 chr1.NT_077949.1_171284 C/T 2 rs4439389 1 1 149075836 NT_004487.20 5891249
ss11197638 chr1.NT_004671.15_4894616 A/G 3 rs766220 0 1 193570500 NT_004487.20 50385913
ss11196734 chr1.NT_004671.15_13485150 A/G 3 rs4420146 0 1 202161038 NT_004487.20 58976451
ss11196861 chr1.NT_004671.15_14163072 A/C 2 rs4434890 0 1 202838960 NT_004487.20 59654373
ss11197437 chr1.NT_031730.8_262174 C/T 2 rs6587407 0 1 247958881 NT_167186.2 24349946
ss11197391 chr1.NT_022052.2_30518 C/T 2 rs2379558 1 3 75742602 NT_022517.19 75732602
ss11196508 chr1.NT_077930.1_39751 A/G 2 rs2951570 0 4 49498542 NT_037645.2 11618
ss11196685 chr1.NT_077930.1_50083 A/G 2 rs1701171 1 N.D. N.D.
ss11196801 chr1.NT_077930.1_54262 C/T 2 rs1847780 0 N.D. N.D.
ss11196930 chr1.NT_077387.2_66440 A/G 2 rs2494853 0 N.D. N.D.
ss11196893 chr1.NT_077387.2_45866 A/C 2 rs2843669 0 N.D. N.D.
ss11196903 chr1.NT_077387.2_36255 A/C 2 rs4091322 0 N.D. N.D.
ss11197776 chr1.NT_077930.1_51633 A/T 3 rs4094035 1 N.D. N.D.
ss11197732 chr1.NT_022052.2_46138 A/T 3 rs4353108 1 N.D. N.D.
ss11197231 chr1.NT_077387.2_183007 A/G 2 rs4463683 0 N.D. N.D.
ss11196752 chr1.NT_077387.2_117352 A/G 2 rs6422260 0 N.D. N.D.
ss11196479 chr1.NT_077944.1_168496 C/G 2 rs7410924 0 N.D. N.D.
ss11196987 chr1.NT_077930.1_186543 C/T 3 rs7411276 0 N.D. N.D.
ss11197135 chr1.NT_077944.1_170058 A/G 2 rs7411385 0 N.D. N.D.
ss11197450 chr1.NT_077944.1_169737 C/G 2 rs7411596 0 N.D. N.D.
ss11196654 chr1.NT_022052.2_37417 C/G 2 rs10453849 0 N.D. N.D.
ss11197731 chr1.NT_022052.2_46131 A/C 2 rs879966673 0 N.D. N.D.
30 of 37381 subsnp's starting at ss11196711. ss# starting at ss

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