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View SNP Submission Batch
Submitter Handle:WI_SSAHASNP
Submitter Batch ID:WIBR_S228_SNPS_200310
Submitter Method ID:WIBR_S228_SNPS_200310
Citation:SNPs detected by comparing chromosome Y reads to NCBI build 34 Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:7733


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss11393677 chr1.NT_034471.3_43918 C/T 5 rs1578391 1 1 629906 NT_032977.10 43918
ss11389136 chr1.NT_077389.2_299328 A/G 2 rs2987947 1 1 144974911 NT_004487.20 1790324
ss11394981 chr1.NT_077389.2_299442 C/T 2 rs2790271 1 1 144975025 NT_004487.20 1790438
ss11371363 chr1.NT_004671.15_592893 A/G 2 rs1418546 0 1 189268776 NT_004487.20 46084189
ss11402092 chr1.NT_004671.15_1330124 C/G 2 rs7541893 0 1 190006008 NT_004487.20 46821421
ss11379359 chr1.NT_004671.15_5371609 A/T 2 rs7530695 0 1 194047493 NT_004487.20 50862906
ss11375208 chr1.NT_004671.15_10715830 A/G 4 rs494472 1 1 199391718 NT_004487.20 56207131
ss11368670 chr1.NT_077930.1_195077 A/C 2 rs7525487 0 11 54802873 NT_167190.2 277799
ss11368675 chr1.NT_077930.1_195089 C/G 2 rs7525489 0 11 54802885 NT_167190.2 277811
ss11182445 chr14.NT_026437.10_20729729 C/T 2 rs4903651 0 14 40340487 NT_026437.13 22116964
ss11191721 chr18.NT_010966.13_14792729 C/T 2 rs4799395 0 18 35723663 NT_010966.15 14812457
ss11193332 chr19.NT_011109.15_1299320 C/T 3 rs4805240 0 19 28540195 NT_011109.17 1299321
ss11193354 chr19.NT_011109.15_1299578 A/T 3 rs4805241 0 19 28540453 NT_011109.17 1299579
ss11194552 chr20.NT_011387.8_11399344 C/T 2 rs4813057 0 20 11478696 NT_011387.9 11418696
ss11152357 chr5.NT_023133.11_14394686 A/T 2 rs4867931 0 5 170158124 NT_023133.14 14396800
ss11157476 chr6.NT_007299.12_4860459 A/C 2 rs1634220 1 6 66330393 NT_025741.16 6100459
ss11159107 chr7.NT_007758.10_10821833 A/C 2 rs2528708 1 7 73374590 NT_007933.16 10867811
ss11363145 chr1.NT_077387.2_14481 A/G 2 rs2500983 1 N.D. N.D.
ss11344965 chr1.NT_077387.2_15818 A/C 2 rs2841703 0 N.D. N.D.
ss11364576 chr1.NT_077387.2_16120 C/T 2 rs2841706 0 N.D. N.D.
ss11350277 chr1.NT_077387.2_16250 A/C 2 rs2843648 0 N.D. N.D.
ss11386455 chr1.NT_077387.2_15823 A/G 2 rs2843686 0 N.D. N.D.
ss11386680 chr1.NT_077387.2_15991 A/G 2 rs2843688 0 N.D. N.D.
ss11363889 chr1.NT_077387.2_14802 A/T 2 rs3123441 1 N.D. N.D.
ss11379718 chr1.NT_077387.2_14784 G/T 2 rs3123442 1 N.D. N.D.
ss11380111 chr1.NT_077387.2_14986 A/G 2 rs4240993 0 N.D. N.D.
ss11187552 chr16.NT_035363.3_1082 C/G 2 rs4249969 1 N.D. N.D.
ss11378373 chr1.NT_077930.1_194763 C/T 2 rs6604339 0 N.D. N.D.
ss11346214 chr1.NT_022052.2_49936 A/C 2 rs7514465 0 N.D. N.D.
ss11371938 chr1.NT_022052.2_122853 C/T 2 rs7527023 0 N.D. N.D.
30 of 7733 subsnp's starting at ss11393677. ss# starting at ss

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