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View SNP Submission Batch
Submitter Handle:WI_SSAHASNP
Submitter Batch ID:WIBR_S224_SNPS_200310
Submitter Method ID:WIBR_S224_SNPS_200310
Citation:SNPs detected by comparing chromosome 5 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:101251


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss11142716 chr3.NT_005535.15_222416 A/G 2 rs7373016 0 3 194558195 NT_005612.17 100852621
ss11149954 chr4.NT_006238.10_8955301 A/G 2 rs4629418 1 4 49251318 NT_006238.12 16412302
ss11147457 chr4.NT_006238.10_8958649 C/T 2 rs4089334 0 4 49254666 NT_006238.12 16415650
ss11149514 chr4.NT_006238.10_8969814 C/T 2 rs4103913 0 4 49265831 NT_006238.12 16426815
ss11146506 chr4.NT_006238.10_8969962 A/G 2 rs6413708 0 4 49265979 NT_006238.12 16426963
ss11146434 chr4.NT_006216.14_2204527 C/G 2 rs2554071 0 4 72831800 NT_016354.20 13910419
ss11146437 chr4.NT_006216.14_2204543 C/G 2 rs2614356 0 4 72831816 NT_016354.20 13910435
ss11150370 chr5.NT_023089.13_597896 A/G 2 rs1697951 1 5 615043 NT_006576.17 605043
ss11150508 chr5.NT_023089.13_2329578 A/G 3 rs469247 0 5 2346726 NT_006576.17 2336726
ss11150435 chr5.NT_023089.13_2768300 G/T 2 rs3958414 1 5 2785448 NT_006576.17 2775448
ss11150436 chr5.NT_023089.13_2768338 C/T 2 rs4272137 0 5 2785486 NT_006576.17 2775486
ss11150658 chr5.NT_023089.13_7739238 C/G 2 rs6555493 0 5 7756387 NT_006576.17 7746387
ss11150538 chr5.NT_023089.13_7987486 G/T 2 rs4701802 0 5 8004635 NT_006576.17 7994635
ss11150545 chr5.NT_023089.13_10164102 A/T 2 rs4701863 0 5 10181252 NT_006576.17 10171252
ss11150462 chr5.NT_006431.13_1562515 A/G 2 rs4865679 0 5 51701938 NT_034772.7 1592131
ss11150496 chr5.NT_006431.13_8079119 A/G 2 rs2962000 1 5 58218549 NT_034772.7 8108742
ss11150441 chr5.NT_006431.13_18839800 A/G 2 rs4976061 1 5 68979231 NT_034772.7 18869424
ss11150554 chr5.NT_006431.13_18848336 C/T 2 rs4976060 1 5 68987767 NT_034772.7 18877960
ss11150495 chr5.NT_006713.13_1790283 A/G 2 rs6452815 0 5 73102324 NT_034772.7 22992517
ss11150684 chr5.NT_006713.13_4637515 A/G 3 rs7378781 0 5 75949558 NT_034772.7 25839751
ss11150350 chr5.NT_006713.13_6189909 C/T 2 rs3911635 1 5 77501952 NT_034772.7 27392145
ss11150562 chr5.NT_006713.13_10635661 C/T 2 rs4703861 0 5 81947710 NT_034772.7 31837903
ss11150605 chr5.NT_006713.13_13598823 G/T 2 rs7378722 0 5 84910873 NT_034772.7 34801066
ss11150452 chr5.NT_006713.13_19682046 A/G 3 rs4916836 0 5 90994097 NT_034772.7 40884290
ss11150625 chr5.NT_023133.11_4400561 C/T 2 rs7378736 0 5 160163996 NT_023133.14 4402672
ss11150354 chr5.NT_023133.11_6499966 C/T 2 rs2964645 0 5 162263402 NT_023133.14 6502078
ss11150578 chr5.NT_023133.11_13848925 A/G 2 rs4868722 0 5 169612363 NT_023133.14 13851039
ss11150474 chr5.NT_023133.11_19020647 A/G 2 rs4868454 0 5 174784058 NT_023133.14 19022734
ss11136233 chr1.NT_077387.2_146232 A/G 2 rs4317820 0 N.D. N.D.
ss11131519 chr1.NT_077930.1_18608 A/T 2 rs4970241 0 N.D. N.D.
30 of 101251 subsnp's starting at ss11142716. ss# starting at ss

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