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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR13_NA11321_extra
Submitter Method ID:CHR13_NA11321
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:11587


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss8351395 NT_011387.8_1331585 A/T 2 rs6042066 0 20 1410941 NT_011387.9 1350941
ss8351400 NT_011387.8_1332280 A/T 2 rs6042071 0 20 1411636 NT_011387.9 1351636
ss8340202 NT_011387.8_1333279 C/T 2 rs6033697 0 20 1412635 NT_011387.9 1352635
ss8340203 NT_011387.8_1333350 C/T 2 rs6033698 0 20 1412706 NT_011387.9 1352706
ss8354178 NT_011387.8_1644837 C/T 2 rs202516 0 20 1724191 NT_011387.9 1664191
ss8355177 NT_011387.8_1739576 C/G 2 rs6044840 0 20 1818930 NT_011387.9 1758930
ss8355178 NT_011387.8_1739717 C/G 2 rs6044841 0 20 1819071 NT_011387.9 1759071
ss8342423 NT_011387.8_1931477 C/T 2 rs2050213 0 20 2010831 NT_011387.9 1950831
ss8345507 NT_011387.8_3591226 G/T 2 rs44707 1 20 3670579 NT_011387.9 3610579
ss8345508 NT_011387.8_3591269 A/G 2 rs598418 1 20 3670622 NT_011387.9 3610622
ss8346717 NT_011387.8_6440021 C/T 2 rs6038530 0 20 6519374 NT_011387.9 6459374
ss8347118 NT_011387.8_7383541 A/G 2 rs6038836 0 20 7462894 NT_011387.9 7402894
ss8348223 NT_011387.8_9987435 A/G 2 rs598275 0 20 10066787 NT_011387.9 10006787
ss8349420 NT_011387.8_11236898 C/G 2 rs6040526 0 20 11316250 NT_011387.9 11256250
ss8352085 NT_011387.8_14181784 G/T 3 rs2423779 0 20 14261138 NT_011387.9 14201138
ss8354428 NT_011387.8_16642501 C/T 2 rs761228 1 20 16721856 NT_011387.9 16661856
ss8355253 NT_011387.8_17516565 C/G 2 rs6044899 0 20 17595920 NT_011387.9 17535920
ss8342160 NT_011387.8_18623363 A/G 2 rs6035105 0 20 18702719 NT_011387.9 18642719
ss8356222 NT_011387.8_18623617 A/G 2 rs6045564 0 20 18702973 NT_011387.9 18642973
ss8356337 NT_011387.8_18763970 A/G 2 rs1474760 1 20 18843326 NT_011387.9 18783326
ss8342650 NT_011387.8_19813284 C/G 3 rs2328471 0 20 19892640 NT_011387.9 19832640
ss8357338 NT_011387.8_19813607 A/G 3 rs1885113 0 20 19892963 NT_011387.9 19832963
ss8359030 NT_011387.8_21902333 A/C 2 rs169311 0 20 21981695 NT_011387.9 21921695
ss8359031 NT_011387.8_21902422 A/C 2 rs201545 0 20 21981784 NT_011387.9 21921784
ss8359696 NT_011387.8_22554132 A/G 2 rs1203952 0 20 22633494 NT_011387.9 22573494
ss8310509 NT_011333.5_239563 C/T 2 rs6011434 0 20 62871580 NT_011362.11 31820072
ss8309802 NT_011333.5_884754 A/T 2 rs380158 0 20 63516771 NT_011362.11 32465263
ss8311104 NT_011333.5_885226 C/G 2 rs6011867 0 20 63517243 NT_011362.11 32465735
ss7991113 NT_011516.5_163756 G/T 2 rs140353 0 22 15764207 NT_187355.1 609889
ss7991170 NT_011516.5_8463 C/T 2 rs5746347 0 22 15919545 NT_187355.1 765227
30 of 11587 subsnp's starting at ss8351395. ss# starting at ss