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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR1_NA17019
Submitter Method ID:CHR1_NA17019
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:60954


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss8340466 NT_011387.8_1412779 C/T 2 rs6033901 0 20 1492133 NT_011387.9 1432133
ss8352042 NT_011387.8_1412818 A/T 2 rs6042585 0 20 1492172 NT_011387.9 1432172
ss8345270 NT_011387.8_3007428 A/C 2 rs6037482 0 20 3086782 NT_011387.9 3026782
ss8345848 NT_011387.8_4499841 A/T 2 rs6037881 0 20 4579195 NT_011387.9 4519195
ss8346686 NT_011387.8_6370540 C/T 2 rs980690 0 20 6449893 NT_011387.9 6389893
ss8347654 NT_011387.8_8655188 A/T 2 rs6039245 0 20 8734541 NT_011387.9 8674541
ss8348065 NT_011387.8_9629551 A/G 2 rs6039555 0 20 9708903 NT_011387.9 9648903
ss8348380 NT_011387.8_10122254 A/T 2 rs6039762 0 20 10201606 NT_011387.9 10141606
ss8348382 NT_011387.8_10123783 C/G 2 rs6039764 0 20 10203135 NT_011387.9 10143135
ss8339045 NT_011387.8_10285394 A/G 3 rs2423503 0 20 10364746 NT_011387.9 10304746
ss8348540 NT_011387.8_10285462 A/G 2 rs6039875 0 20 10364814 NT_011387.9 10304814
ss8349703 NT_011387.8_11467112 C/T 2 rs1076794 0 20 11546464 NT_011387.9 11486464
ss8349775 NT_011387.8_11574871 C/G 2 rs6040820 0 20 11654223 NT_011387.9 11594223
ss8339914 NT_011387.8_12618095 A/G 2 rs6033493 0 20 12697448 NT_011387.9 12637448
ss8350783 NT_011387.8_12680262 C/T 2 rs6041602 0 20 12759615 NT_011387.9 12699615
ss8351384 NT_011387.8_13297974 C/T 2 rs6042057 0 20 13377327 NT_011387.9 13317327
ss8340291 NT_011387.8_13520843 C/T 2 rs6033768 0 20 13600196 NT_011387.9 13540196
ss8351594 NT_011387.8_13520868 G/T 2 rs6042236 0 20 13600221 NT_011387.9 13540221
ss8340572 NT_011387.8_14453687 A/G 2 rs1569997 0 20 14533041 NT_011387.9 14473041
ss8341934 NT_011387.8_17947481 C/T 2 rs6034942 0 20 18026837 NT_011387.9 17966837
ss8342336 NT_011387.8_19093755 C/T 2 rs2328366 0 20 19173111 NT_011387.9 19113111
ss8342596 NT_011387.8_19673890 C/T 2 rs808712 0 20 19753246 NT_011387.9 19693246
ss8343676 NT_011387.8_22806230 C/T 2 rs6036247 0 20 22885592 NT_011387.9 22825592
ss8343677 NT_011387.8_22806951 C/T 2 rs4815153 0 20 22886313 NT_011387.9 22826313
ss8309465 NT_011333.5_1472434 C/T 2 rs3003152 0 20 64104451 NT_011362.11 33052943
ss7991116 NT_011516.5_171894 A/T 2 rs1981346 0 22 15756069 NT_187355.1 601751
ss7991186 NT_011516.5_94113 C/T 2 rs2105543 0 22 15833850 NT_187355.1 679532
ss7991179 NT_011516.5_91164 A/G 2 rs2713395 0 22 15836799 NT_187355.1 682481
ss8025599 NT_019197.3_53819 C/T 2 rs5771131 0 22 50040399 NT_011526.8 65034
ss8025600 NT_019197.3_54035 A/T 2 rs1883291 0 22 50040615 NT_011526.8 65250
30 of 60954 subsnp's starting at ss8340466. ss# starting at ss