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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR20_NA17119_extra
Submitter Method ID:CHR20_NA17119
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:9842


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss7991082 NT_011516.5_102606 C/T 2 rs2844970 0 22 15825357 NT_187355.1 671039
ss7991080 NT_011516.5_102450 A/G 2 rs2844969 0 22 15825513 NT_187355.1 671195
ss7991076 NT_011516.5_100198 C/T 2 rs2713412 0 22 15827765 NT_187355.1 673447
ss12813619 NT_007592.13_2490977 A/G 2 rs1150569 0 6 11632486 NT_007592.16 11572486
ss12797817 NT_007592.13_5373443 C/T 2 rs1124457 0 6 14514961 NT_007592.16 14454961
ss12837190 NT_007592.13_12340476 C/T 2 rs6456430 0 6 21481994 NT_007592.16 21421994
ss12813153 NT_007592.13_17254978 G/T 2 rs7356988 0 6 26396499 NT_007592.16 26336499
ss12837491 NT_007592.13_17877826 A/G 2 rs6456766 0 6 27051796 NT_007592.16 26991796
ss12839050 NT_007592.13_29004078 A/G 2 rs7356904 0 6 38239175 NT_007592.16 38179175
ss12796090 NT_007592.13_32629966 A/G 2 rs2479722 0 6 41865101 NT_007592.16 41805101
ss12820050 NT_007299.12_4350242 C/T 2 rs1938058 1 6 65820176 NT_025741.16 5590242
ss12827131 NT_007299.12_5676382 C/T 2 rs2444628 0 6 67146316 NT_025741.16 6916382
ss12802296 NT_007299.12_11604827 A/G 2 rs2350370 0 6 73074931 NT_025741.16 12844997
ss12779485 NT_007299.12_14160238 G/T 2 rs525178 1 6 75630350 NT_025741.16 15400416
ss12784388 NT_007299.12_18055175 A/G 2 rs7356969 0 6 79525287 NT_025741.16 19295353
ss12818872 NT_007299.12_21244047 A/C 2 rs6415001 0 6 82714159 NT_025741.16 22484225
ss12804563 NT_007299.12_21244203 A/G 2 rs1616571 1 6 82714315 NT_025741.16 22484381
ss12804657 NT_007299.12_22016710 A/C 2 rs1171101 0 6 83486820 NT_025741.16 23256886
ss12818922 NT_007299.12_22026885 C/T 2 rs632850 0 6 83496995 NT_025741.16 23267061
ss12805384 NT_007299.12_26383474 C/G 2 rs6415023 0 6 87853585 NT_025741.16 27623651
ss12824580 NT_007299.12_26383718 A/G 2 rs6454655 0 6 87853829 NT_025741.16 27623895
ss12806095 NT_007299.12_29959274 A/G 2 rs2748287 1 6 91429383 NT_025741.16 31199449
ss12786990 NT_007299.12_29961656 G/T 2 rs2748286 1 6 91431765 NT_025741.16 31201831
ss12829399 NT_007422.12_7271181 A/C 2 rs1039080 0 6 164562807 NT_025741.16 104332873
ss12832505 NT_007583.11_213090 C/T 2 rs2983207 0 6 170233272 NT_025741.16 110003338
ss12832506 NT_007583.11_213162 C/T 2 rs6456180 0 6 170233344 NT_025741.16 110003410
ss12832507 NT_007583.11_213277 C/T 2 rs6456181 0 6 170233459 NT_025741.16 110003525
ss8556648 NT_078109.1_140402 G/T 2 rs1404754 1 X 4006270 NT_167197.2 1873276
ss8829072 NT_028405.9_199245 G/T 2 rs1474123 1 X 114532460 NT_028405.13 201262
ss8829143 NT_028405.9_996495 C/T 2 rs6413658 0 X 115329578 NT_028405.13 998380
30 of 9842 subsnp's starting at ss7991082. ss# starting at ss