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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:CHR9_12_NA17119
Submitter Method ID:CHR9_12_NA17119.1
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:107573


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss8339213 NT_011387.8_107310 A/G 2 rs1857091 1 20 186669 NT_011387.9 126669
ss8340522 NT_011387.8_1427570 C/T 2 rs6033949 0 20 1506924 NT_011387.9 1446924
ss8340982 NT_011387.8_1556137 A/G 2 rs6034239 0 20 1635491 NT_011387.9 1575491
ss8341813 NT_011387.8_1753373 C/T 2 rs156353 1 20 1832727 NT_011387.9 1772727
ss8342546 NT_011387.8_1957767 A/G 2 rs6035403 0 20 2037121 NT_011387.9 1977121
ss8345448 NT_011387.8_3474340 A/G 2 rs235590 1 20 3553693 NT_011387.9 3493693
ss8345791 NT_011387.8_4350190 A/G 2 rs172471 1 20 4429543 NT_011387.9 4369543
ss8346442 NT_011387.8_5827344 C/T 3 rs1287032 0 20 5906698 NT_011387.9 5846698
ss8339396 NT_011387.8_11204194 C/T 2 rs2327371 0 20 11283546 NT_011387.9 11223546
ss8339400 NT_011387.8_11213157 A/T 2 rs6033092 0 20 11292509 NT_011387.9 11232509
ss8340688 NT_011387.8_14837484 C/T 2 rs6034061 0 20 14916838 NT_011387.9 14856838
ss8341020 NT_011387.8_15622195 A/C 2 rs6034266 0 20 15701550 NT_011387.9 15641550
ss8341166 NT_011387.8_16016569 C/G 2 rs4814431 0 20 16095924 NT_011387.9 16035924
ss8341399 NT_011387.8_16542540 A/G 2 rs2050405 0 20 16621895 NT_011387.9 16561895
ss8341735 NT_011387.8_17291138 A/G 2 rs6034806 0 20 17370493 NT_011387.9 17310493
ss8341924 NT_011387.8_17921663 A/T 2 rs4814678 0 20 18001019 NT_011387.9 17941019
ss8342707 NT_011387.8_19908355 A/G 2 rs1983197 0 20 19987711 NT_011387.9 19927711
ss8343051 NT_011387.8_20957279 A/G 2 rs4599194 0 20 21036638 NT_011387.9 20976638
ss8343877 NT_011387.8_23321786 G/T 2 rs6036400 0 20 23401149 NT_011387.9 23341149
ss8344335 NT_011387.8_24276795 C/T 2 rs6036746 0 20 24356159 NT_011387.9 24296159
ss8344850 NT_011387.8_25481863 C/G 2 rs6037142 0 20 25561227 NT_011387.9 25501227
ss8309795 NT_011333.5_848729 C/T 2 rs4809307 0 20 63480746 NT_011362.11 32429238
ss8311084 NT_011333.5_858332 A/G 2 rs310607 0 20 63490349 NT_011362.11 32438841
ss8311085 NT_011333.5_858356 C/T 2 rs310608 0 20 63490373 NT_011362.11 32438865
ss8310300 NT_011333.5_1496930 A/G 2 rs542051 0 20 64128947 NT_011362.11 33077439
ss8285030 NT_011516.5_97765 A/T 2 rs2020145 0 22 15830198 NT_187355.1 675880
ss8285029 NT_011516.5_97398 A/G 2 rs5992032 0 22 15830565 NT_187355.1 676247
ss7991182 NT_011516.5_91784 A/T 2 rs2212070 0 22 15836179 NT_187355.1 681861
ss8025635 NT_019197.3_122238 A/G 2 rs138217 0 22 50108818 NT_011526.8 133453
ss8308810 NT_019197.3_254462 C/T 2 rs6010216 0 22 50241042 NT_011526.8 265677
30 of 107573 subsnp's starting at ss8339213. ss# starting at ss