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View SNP Submission Batch
Submitter Handle:PERLEGEN
Submitter Batch ID:08-28-2003
Submitter Method ID:WAFER_HYB
Citation:Blocks of Limited Haplotype Diversity Revealed by High-Resolution Scanning of Human Chromosome 21
Population:NCBI|NIHPDR
Comment:SNPs covering 10 regions for the ENCODE project: chr2:51616414-52116413,chr2:234508167-235008166,chr4:118639860-119139859,chr7:26665793-27165792,chr7:89381916-89881915, chr7:126119343-126619342,chr8:118481838-118981837,chr9:125138972-125638971,chr12:40056957-40556956,chr18:25353226-25853225
Batch Total SubSNP(ss) Count:3134


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss14872979 PS00487709 C/T 17 rs10486494 0 7 27221156 NT_007819.18 27211156
ss14872980 PS00487795 C/T 20 rs6957104 0 7 27312506 NT_007819.18 27302506
ss14872981 PS00487850 C/T 21 rs10486496 0 7 27354777 NT_007819.18 27344777
ss12673835 PS00487862 G/T 21 rs9332393 0 7 27363592 NT_007819.18 27353592
ss14873590 PS00512451 G/T 23 rs10487105 0 7 90228436 NT_007933.16 27721657
ss14873591 PS00512452 C/T 25 rs10487106 0 7 90229436 NT_007933.16 27722657
ss14873592 PS00512473 A/G 25 rs10487107 0 7 90241919 NT_007933.16 27735140
ss14873593 PS00512524 A/G 15 rs10487108 0 7 90270808 NT_007933.16 27764029
ss14873594 PS00512527 C/T 17 rs10262472 0 7 90271069 NT_007933.16 27764290
ss14873595 PS00512545 C/G 10 rs9655741 0 7 90304560 NT_007933.16 27797781
ss14873596 PS00512548 A/C 19 rs10487111 0 7 90306574 NT_007933.16 27799795
ss14873597 PS00512653 G/T 25 rs10487112 0 7 90444092 NT_007933.16 27937313
ss14873598 PS00512672 G/T 25 rs10487113 0 7 90469584 NT_007933.16 27962805
ss14873599 PS00512688 C/T 24 rs10487114 0 7 90479419 NT_007933.16 27972640
ss14873600 PS00512700 A/C 24 rs10487115 0 7 90485962 NT_007933.16 27979183
ss14873601 PS00512710 A/G 25 rs10487116 0 7 90490301 NT_007933.16 27983522
ss14873602 PS00512722 A/G 25 rs10487117 0 7 90506165 NT_007933.16 27999386
ss14873603 PS00512723 A/C 21 rs10487118 0 7 90506197 NT_007933.16 27999418
ss14873604 PS00512758 A/G 25 rs10487119 0 7 90519465 NT_007933.16 28012686
ss14873605 PS00512766 A/G 23 rs10487120 0 7 90524639 NT_007933.16 28017860
ss14873948 PS00528256 A/G 20 rs10487463 0 7 126979818 NT_007933.16 64473039
ss14873949 PS00528362 A/C 23 rs10487464 0 7 127056647 NT_007933.16 64549868
ss14873950 PS00528363 C/T 22 rs10487465 0 7 127056727 NT_007933.16 64549948
ss14873951 PS00528364 C/T 21 rs10487466 0 7 127056760 NT_007933.16 64549981
ss14873952 PS00528368 C/T 20 rs6467108 0 7 127057596 NT_007933.16 64550817
ss14873953 PS00528369 A/G 22 rs6467109 0 7 127057631 NT_007933.16 64550852
ss14873954 PS00528371 A/G 22 rs7795745 0 7 127057701 NT_007933.16 64550922
ss14873955 PS00528380 C/T 23 rs10487470 0 7 127066369 NT_007933.16 64559590
ss14873956 PS00528447 C/T 23 rs6975798 0 7 127105496 NT_007933.16 64598717
ss14873957 PS00528586 A/G 23 rs10487472 0 7 127225983 NT_007933.16 64719204
30 of 3134 subsnp's starting at ss14872979. ss# starting at ss