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View SNP Submission Batch
Submitter Handle:PERLEGEN
Submitter Batch ID:11-25-2003
Submitter Method ID:WAFER_HYB
Citation:Blocks of Limited Haplotype Diversity Revealed by High-Resolution Scanning of Human Chromosome 21
Population:NCBI|NIHPDR
Comment:SNPs identified by Perlegen and used by Affymetrix for their 120K genotyping project.
Batch Total SubSNP(ss) Count:2905


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss16333703 PS01839419 C/T 20 rs11564776 0 1 824920 NT_032977.10 238932
ss16333704 PS00982275 C/T 20 rs619729 1 1 4461676 NT_032977.10 3875688
ss16333705 PS00982276 G/T 20 rs619705 1 1 4461692 NT_032977.10 3875704
ss16333706 PS00983172 C/T 20 rs551207 0 1 5947386 NT_032977.10 5361398
ss16333707 PS00985870 C/T 20 rs2289478 1 1 9930054 NT_032977.10 9344066
ss16333708 PS00655027 A/T 20 rs848578 0 1 12777491 NT_032977.10 12191503
ss16333709 PS00989420 G/T 20 rs2486769 0 1 14459813 NT_032977.10 13873825
ss16333710 PS00679708 C/T 20 rs2076616 0 1 17086006 NT_032977.10 16500018
ss16333711 PS00707579 C/T 20 rs1771321 1 1 17853676 NT_032977.10 17267688
ss16333712 PS00652587 A/G 20 rs3888820 1 1 20266382 NT_032977.10 19680394
ss16333713 PS00995723 A/G 20 rs3767237 0 1 20773198 NT_032977.10 20187210
ss16333714 PS00652212 C/T 20 rs212509 1 1 21244638 NT_032977.10 20658650
ss16333715 PS00996633 A/G 20 rs333194 1 1 21751163 NT_032977.10 21165175
ss16333716 PS00652880 C/G 20 rs3920498 0 1 22166394 NT_032977.10 21580406
ss16333717 PS00689927 A/T 20 rs3754010 0 1 22510006 NT_032977.10 21924018
ss16333718 PS00690208 C/T 20 rs686663 1 1 23038691 NT_032977.10 22452703
ss16333719 PS00997979 G/T 20 rs639802 1 1 23279508 NT_032977.10 22693520
ss16333720 PS00998656 A/G 20 rs3211051 0 1 23961914 NT_032977.10 23375926
ss16333721 PS00998658 C/T 20 rs3211053 0 1 23961986 NT_032977.10 23375998
ss16333722 PS00654524 C/T 20 rs1292081 0 1 27644991 NT_032977.10 27059003
ss16333723 PS01000789 C/G 20 rs1292080 1 1 27645570 NT_032977.10 27059582
ss16333724 PS00654833 A/G 20 rs3766951 0 1 28843047 NT_032977.10 28257059
ss16333725 PS01009394 A/C 20 rs3738696 0 1 35186666 NT_032977.10 34600678
ss16333726 PS00682381 C/G 20 rs215211 1 1 37493869 NT_032977.10 36907881
ss16333727 PS00682382 C/G 20 rs215212 1 1 37493898 NT_032977.10 36907910
ss16333728 PS01015077 A/G 20 rs1126973 0 1 40073404 NT_032977.10 39487416
ss16333729 PS00655259 A/G 20 rs671704 0 1 40683974 NT_032977.10 40097986
ss16333730 PS01015308 C/T 20 rs823678 0 1 40767555 NT_032977.10 40181567
ss16333731 PS01019446 A/G 20 rs2760081 0 1 42797002 NT_032977.10 42211014
ss16333732 PS01019708 G/T 20 rs841856 1 1 42934442 NT_032977.10 42348454
30 of 2905 subsnp's starting at ss16333703. ss# starting at ss