NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:PGA-UW-FHCRC
Submitter Batch ID:ALOX15-AFRICAN-121703
Submitter Method ID:METHOD-E
Citation:SeattleSNPs. NHLBI Program for Genomic Applications HL66682
Population:PGA-AFRICAN-PANEL
Comment:These SNPs were generated as part of the NHLBI Program for Genomic Applications (PGA) to develop genomic resources distributed to the research community. Please see pga.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:48


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss16339085 ALOX15-005598 A/G 46 rs8066249 1 17 4637748 NT_010718.17 4148761
ss16339083 ALOX15-005424 A/G 46 rs11568107 0 17 4637922 NT_010718.17 4148935
ss16339079 ALOX15-005280 C/T 46 rs8064743 1 17 4638066 NT_010718.17 4149079
ss16339078 ALOX15-005081 C/T 46 rs3887815 0 17 4638265 NT_010718.17 4149278
ss16339073 ALOX15-003924 C/T 48 rs11078528 0 17 4639422 NT_010718.17 4150435
ss16339071 ALOX15-003534 C/T 46 rs11568098 0 17 4639812 NT_010718.17 4150825
ss16339070 ALOX15-003503 C/T 46 rs3852831 0 17 4639843 NT_010718.17 4150856
ss16339055 ALOX15-002780 C/T 46 rs11568087 0 17 4640565 NT_010718.17 4151578
ss16339054 ALOX15-002711 -/GA 46 rs11568086 0 17 4640633 NT_010718.17 4151646
ss16339053 ALOX15-002704 A/G 46 rs11568085 0 17 4640641 NT_010718.17 4151654
ss16339052 ALOX15-002690 A/G 46 rs11568084 0 17 4640655 NT_010718.17 4151668
ss16339049 ALOX15-002307 C/T 38 rs9903172 1 17 4641038 NT_010718.17 4152051
ss16339048 ALOX15-002252 -/AA 46 rs11568080 0 17 4641092 NT_010718.17 4152105
ss16339044 ALOX15-002120 C/T 46 rs11568076 0 17 4641225 NT_010718.17 4152238
ss16339043 ALOX15-001999 C/T 48 rs11568075 0 17 4641346 NT_010718.17 4152359
ss16339041 ALOX15-001505 C/G 46 rs2664593 0 17 4641837 NT_010718.17 4152850
ss16339040 ALOX15-001474 C/G 46 rs2664592 0 17 4641868 NT_010718.17 4152881
ss16339039 ALOX15-001419 G/T 46 rs7220870 1 17 4641923 NT_010718.17 4152936
ss16339036 ALOX15-001262 A/G 46 rs34104097 0 17 4642078 NT_010718.17 4153091
ss16339032 ALOX15-001054 A/G 44 rs2255888 1 17 4642286 NT_010718.17 4153299
ss16339029 ALOX15-000260 A/G 42 rs7207078 1 17 4643080 NT_010718.17 4154093
ss16339027 ALOX15-000190 C/T 42 rs11568061 0 17 4643150 NT_010718.17 4154163
ss16339060 ALOX15-002922 C/T 46 rs3912151 1 17 6656421 NT_010718.17 6167434
ss16339067 ALOX15-003367 A/G 46 rs4069784 0 17 6656866 NT_010718.17 6167879
ss16339081 ALOX15-005358 A/G 46 rs11568105 0 17 6659143 NT_010718.17 6170156
ss16339051 ALOX15-002567 C/T 46 N.D. N.D.
ss16339058 ALOX15-002873 A/G 46 N.D. N.D.
ss16339062 ALOX15-003045 A/G 46 N.D. N.D.
ss16339064 ALOX15-003190 A/C 46 N.D. N.D.
ss16339065 ALOX15-003223 A/G 46 N.D. N.D.
30 of 48 subsnp's starting at ss16339085. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement