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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:PTCH2-PDR90-012104
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:87


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss16358441 PTCH2-007436 C/T 170 rs11573561 0 1 44836117 NT_032977.10 44250129
ss16358440 PTCH2-007401 A/G 172 rs11573560 0 1 44836152 NT_032977.10 44250164
ss16358439 PTCH2-007195 A/G 166 rs11573559 0 1 44836358 NT_032977.10 44250370
ss16358438 PTCH2-007029 C/T 176 rs11573558 0 1 44836524 NT_032977.10 44250536
ss16358437 PTCH2-006634 A/C 154 rs11573557 0 1 44836919 NT_032977.10 44250931
ss16358436 PTCH2-005703 C/T 118 rs11211043 0 1 44837850 NT_032977.10 44251862
ss16358435 PTCH2-005476 C/T 160 rs11573556 0 1 44838077 NT_032977.10 44252089
ss16358434 PTCH2-005270 C/T 162 rs11573555 0 1 44838283 NT_032977.10 44252295
ss16358433 PTCH2-005266 C/G/T 162 rs11573554 0 1 44838287 NT_032977.10 44252299
ss16358432 PTCH2-005060 C/T 172 rs11573553 0 1 44838493 NT_032977.10 44252505
ss16358431 PTCH2-004960 C/T 166 rs11573552 0 1 44838593 NT_032977.10 44252605
ss16358430 PTCH2-004943 -/TTGT 164 rs11573551 0 1 44838607 NT_032977.10 44252619
ss16358429 PTCH2-004859 C/T 154 rs11573550 0 1 44838694 NT_032977.10 44252706
ss16358428 PTCH2-004371 C/G 174 rs11573549 0 1 44839182 NT_032977.10 44253194
ss16358427 PTCH2-004266 C/T 170 rs11573548 0 1 44839287 NT_032977.10 44253299
ss16358426 PTCH2-004115 C/T 96 rs7554177 1 1 44839438 NT_032977.10 44253450
ss16358425 PTCH2-004065 C/T 150 rs11573547 0 1 44839488 NT_032977.10 44253500
ss16358424 PTCH2-003838 -/CACATA 176 rs11573546 0 1 44839709 NT_032977.10 44253721
ss16358423 PTCH2-003825 A/G 176 rs11573545 0 1 44839722 NT_032977.10 44253734
ss16358422 PTCH2-003779 A/G 176 rs11573544 0 1 44839768 NT_032977.10 44253780
ss16358421 PTCH2-003727 C/G 176 rs11573543 0 1 44839820 NT_032977.10 44253832
ss16358420 PTCH2-003713 C/T 176 rs11573542 0 1 44839834 NT_032977.10 44253846
ss16358419 PTCH2-003701 C/T 176 rs11573541 0 1 44839846 NT_032977.10 44253858
ss16358418 PTCH2-003647 A/G 176 rs11573540 0 1 44839900 NT_032977.10 44253912
ss16358417 PTCH2-001838 A/G 144 rs11573539 0 1 44841709 NT_032977.10 44255721
ss16358416 PTCH2-001713 C/T 148 rs3795720 1 1 44841834 NT_032977.10 44255846
ss16358415 PTCH2-001118 C/T 172 rs11573538 0 1 44842429 NT_032977.10 44256441
ss16358414 PTCH2-000810 C/T 180 rs6696675 1 1 44842737 NT_032977.10 44256749
ss16358413 PTCH2-000393 A/G 178 rs11573537 0 1 44843154 NT_032977.10 44257166
ss16358412 PTCH2-000308 C/G 178 rs11573536 0 1 44843239 NT_032977.10 44257251
30 of 87 subsnp's starting at ss16358441. ss# starting at ss

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