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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR13_NA17119-200402
Submitter Method ID:CHR13_NA17119
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:5166


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18057480 SC-CHR13_NA17119-200402.chr1.NT_004511.16_1049968 A/G 2 rs12016624 0 1 30638720 NT_032977.10 30052732
ss18057479 SC-CHR13_NA17119-200402.chr1.NT_079484.1_6914848 C/G 2 rs12016623 0 1 160495226 NT_004487.20 17310639
ss18057468 SC-CHR13_NA17119-200402.chr1.NT_004487.16_16253976 A/G 2 rs12016619 0 1 187236736 NT_004487.20 44052149
ss18057481 SC-CHR13_NA17119-200402.chr1.NT_077988.2_160296 A/C 2 rs12016625 0 21 9281321 NT_113953.1 35234
ss18057461 SC-CHR13_NA17119-200402.chr1.NT_077988.2_25622 A/C 3 rs9658989 0 21 9313919 NT_113953.1 67832
ss18057459 SC-CHR13_NA17119-200402.chr1.NT_077988.2_32016 G/T 4 rs9658934 0 22 12182431 NT_187337.1 154876
ss18057463 SC-CHR13_NA17119-200402.chr1.NT_077988.2_31828 A/C 2 rs9659226 0 22 12182619 NT_187337.1 155064
ss18057470 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26826 A/C 3 rs9659325 0 22 12187621 NT_187337.1 160066
ss18057486 SC-CHR13_NA17119-200402.chr1.NT_077988.2_13798 A/C 2 rs9803779 0 22 12200649 NT_187337.1 173094
ss18057478 SC-CHR13_NA17119-200402.chr1.NT_077988.2_12165 C/T 2 rs595448 1 22 12202282 NT_187337.1 174727
ss18057477 SC-CHR13_NA17119-200402.chr1.NT_077988.2_12090 A/C 2 rs9725908 0 22 12202357 NT_187337.1 174802
ss18057460 SC-CHR13_NA17119-200402.chr1.NT_077988.2_25124 A/C 2 N.D. N.D.
ss18057462 SC-CHR13_NA17119-200402.chr1.NT_077988.2_25801 A/C 4 N.D. N.D.
ss18057465 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26192 A/C 5 N.D. N.D.
ss18057466 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26230 A/T 2 N.D. N.D.
ss18057467 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26244 A/T 2 N.D. N.D.
ss18057483 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26161 A/G 2 N.D. N.D.
ss18057484 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26315 A/G 2 N.D. N.D.
ss18057485 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26413 A/G 2 N.D. N.D.
ss18057475 SC-CHR13_NA17119-200402.chr1.NT_077387.2_115289 A/T 2 rs10430176 0 N.D. N.D.
ss18057471 SC-CHR13_NA17119-200402.chr1.NT_077387.2_118767 A/G 2 rs10430179 0 N.D. N.D.
ss18057488 SC-CHR13_NA17119-200402.chr1.NT_077387.2_118895 C/G 2 rs10430181 0 N.D. N.D.
ss18057473 SC-CHR13_NA17119-200402.chr1.NT_077387.2_119079 A/G 2 rs10430182 0 N.D. N.D.
ss18057474 SC-CHR13_NA17119-200402.chr1.NT_077387.2_115140 A/C 3 rs10437145 0 N.D. N.D.
ss18057487 SC-CHR13_NA17119-200402.chr1.NT_077387.2_97810 A/G 2 rs10437187 0 N.D. N.D.
ss18057464 SC-CHR13_NA17119-200402.chr1.NT_077930.1_30539 A/C 2 rs12016618 0 N.D. N.D.
ss18057472 SC-CHR13_NA17119-200402.chr1.NT_077387.2_40466 A/G 2 rs12016620 0 N.D. N.D.
ss18057476 SC-CHR13_NA17119-200402.chr1.NT_077930.1_192011 A/G 2 rs12016622 0 N.D. N.D.
ss18057482 SC-CHR13_NA17119-200402.chr1.NT_077387.2_46502 C/T 2 rs12016626 0 N.D. N.D.
ss18057469 SC-CHR13_NA17119-200402.chr1.NT_077988.2_26633 A/C 3 rs878999889 0 N.D. N.D.
30 of 5166 subsnp's starting at ss18057480. ss# starting at ss