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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR13_NA07340-200402
Submitter Method ID:CHR13_NA07340
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:7076


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18062654 SC-CHR13_NA07340-200402.chr1.NT_021937.16_3378050 C/T 2 rs10864392 0 1 9190932 NT_032977.10 8604944
ss18062644 SC-CHR13_NA07340-200402.chr1.NT_032977.6_22598414 A/C 2 rs10789085 0 1 60569672 NT_032977.10 59983684
ss18062651 SC-CHR13_NA07340-200402.chr1.NT_028050.13_8592219 A/G 3 rs10783124 0 1 99937719 NT_032977.10 99351731
ss18062636 SC-CHR13_NA07340-200402.chr1.NT_079484.1_4544629 A/G 2 rs10797001 0 1 158125007 NT_004487.20 14940420
ss18062637 SC-CHR13_NA07340-200402.chr1.NT_079484.1_4544639 A/T 2 rs10797002 0 1 158125017 NT_004487.20 14940430
ss18062628 SC-CHR13_NA07340-200402.chr1.NT_004668.16_6832268 C/T 2 rs10918874 0 1 168357558 NT_004487.20 25172971
ss18062633 SC-CHR13_NA07340-200402.chr1.NT_004671.15_2317720 A/G 2 rs10801001 0 1 190993604 NT_004487.20 47809017
ss18062646 SC-CHR13_NA07340-200402.chr1.NT_004671.15_2317863 C/T 2 rs10801002 0 1 190993747 NT_004487.20 47809160
ss18062635 SC-CHR13_NA07340-200402.chr1.NT_004671.15_4304031 C/T 2 rs9427824 0 1 192979915 NT_004487.20 49795328
ss18062642 SC-CHR13_NA07340-200402.chr1.NT_021877.16_4691895 A/T 2 rs11119673 0 1 211059756 NT_004487.20 67875169
ss18062626 SC-CHR13_NA07340-200402.chr1.NT_021877.16_10318793 C/T 2 rs10863268 0 1 216709545 NT_004487.20 73524958
ss18062638 SC-CHR13_NA07340-200402.chr1.NT_021877.16_10882229 C/T 2 rs10863316 0 1 217272981 NT_004487.20 74088394
ss18062634 SC-CHR13_NA07340-200402.chr1.NT_077988.2_32016 G/T 3 rs9658934 0 22 12182431 NT_187337.1 154876
ss18062648 SC-CHR13_NA07340-200402.chr1.NT_077988.2_31828 A/C 2 rs9659226 0 22 12182619 NT_187337.1 155064
ss18062629 SC-CHR13_NA07340-200402.chr1.NT_077988.2_30619 A/G 2 rs11261400 0 22 12183828 NT_187337.1 156273
ss18062653 SC-CHR13_NA07340-200402.chr1.NT_077988.2_26826 A/C 5 rs9659325 0 22 12187621 NT_187337.1 160066
ss18062643 SC-CHR13_NA07340-200402.chr1.NT_077988.2_23424 A/G 6 rs10907424 0 22 12191023 NT_187337.1 163468
ss18062640 SC-CHR13_NA07340-200402.chr1.NT_077988.2_23225 A/G 5 rs761169121 0 22 12191222 NT_187337.1 163667
ss18062649 SC-CHR13_NA07340-200402.chr1.NT_077988.2_18875 G/T 7 rs9659238 0 22 12195572 NT_187337.1 168017
ss18062647 SC-CHR13_NA07340-200402.chr1.NT_077988.2_18328 A/G 2 rs11261356 0 22 12196119 NT_187337.1 168564
ss18062639 SC-CHR13_NA07340-200402.chr1.NT_077988.2_1802 A/T 2 rs12019436 0 22 12212646 NT_187337.1 185091
ss18062632 SC-CHR13_NA07340-200402.chr1.NT_022071.12_84672 C/T 2 N.D. N.D.
ss18062650 SC-CHR13_NA07340-200402.chr1.NT_077988.2_26192 A/C 2 N.D. N.D.
ss18062645 SC-CHR13_NA07340-200402.chr1.NT_077930.1_79667 C/T 2 rs473300 1 N.D. N.D.
ss18062625 SC-CHR13_NA07340-200402.chr1.NT_077930.1_78928 C/T 2 rs4094731 0 N.D. N.D.
ss18062630 SC-CHR13_NA07340-200402.chr1.NT_077988.2_30766 A/T 2 rs9658902 0 N.D. N.D.
ss18062641 SC-CHR13_NA07340-200402.chr1.NT_077930.1_79442 C/T 2 rs11261163 0 N.D. N.D.
ss18062627 SC-CHR13_NA07340-200402.chr1.NT_077988.2_17383 A/G 3 rs144495582 1 N.D. N.D.
ss18062652 SC-CHR13_NA07340-200402.chr1.NT_077988.2_26633 A/C 4 rs878999889 0 N.D. N.D.
ss18062631 SC-CHR13_NA07340-200402.chr1.NT_077988.2_17635 A/G 2 rs879145965 0 N.D. N.D.
30 of 7076 subsnp's starting at ss18062654. ss# starting at ss