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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR1_NA11321-200402
Submitter Method ID:CHR1_NA11321
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:66070


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18069710 SC-CHR1_NA11321-200402.chr1.NT_004321.15_879573 C/T 2 rs12021505 0 1 3656234 NT_032977.10 3070246
ss18069725 SC-CHR1_NA11321-200402.chr1.NT_021937.16_50847 G/T 2 rs11121648 0 1 5863728 NT_032977.10 5277740
ss18069716 SC-CHR1_NA11321-200402.chr1.NT_021937.16_3136003 A/T 2 rs10864372 0 1 8948885 NT_032977.10 8362897
ss18069718 SC-CHR1_NA11321-200402.chr1.NT_077383.3_1015544 A/C 3 rs11248975 0 1 25052828 NT_032977.10 24466840
ss18069708 SC-CHR1_NA11321-200402.chr1.NT_004511.16_1252586 A/G 2 rs10753238 0 1 30841338 NT_032977.10 30255350
ss18069714 SC-CHR1_NA11321-200402.chr1.NT_032977.6_17274956 C/G 3 rs12021507 0 1 55246212 NT_032977.10 54660224
ss18069709 SC-CHR1_NA11321-200402.chr1.NT_032977.6_25320966 C/T 2 rs12021504 0 1 63292225 NT_032977.10 62706237
ss18069703 SC-CHR1_NA11321-200402.chr1.NT_026943.13_2988932 A/C 2 rs12021502 0 1 77703073 NT_032977.10 77117085
ss18069724 SC-CHR1_NA11321-200402.chr1.NT_026943.13_4405484 A/G 3 rs12021509 0 1 79119625 NT_032977.10 78533637
ss18069705 SC-CHR1_NA11321-200402.chr1.NT_028050.13_4818411 G/T 2 rs11165555 0 1 96155033 NT_032977.10 95569045
ss18069719 SC-CHR1_NA11321-200402.chr1.NT_028050.13_9036913 A/G 2 rs10875289 0 1 100382413 NT_032977.10 99796425
ss18069721 SC-CHR1_NA11321-200402.chr1.NT_028050.13_10279894 A/G 2 rs10874498 0 1 101625394 NT_032977.10 101039406
ss18069728 SC-CHR1_NA11321-200402.chr1.NT_029860.11_4127968 A/G 3 rs12021511 0 1 107509235 NT_032977.10 106923247
ss18069702 SC-CHR1_NA11321-200402.chr1.NT_019273.16_4866030 A/G 2 rs12021501 0 1 113327460 NT_032977.10 112741472
ss18069701 SC-CHR1_NA11321-200402.chr1.NT_019273.16_5062939 C/T 2 rs12021500 0 1 113524369 NT_032977.10 112938381
ss18069730 SC-CHR1_NA11321-200402.chr1.NT_019273.16_5112837 C/T 2 rs12021513 0 1 113574267 NT_032977.10 112988279
ss18069722 SC-CHR1_NA11321-200402.chr1.NT_079484.1_2347147 C/G 2 rs12021508 0 1 155927524 NT_004487.20 12742937
ss18069729 SC-CHR1_NA11321-200402.chr1.NT_079484.1_3130600 C/T 3 rs12021512 0 1 156710976 NT_004487.20 13526389
ss18069712 SC-CHR1_NA11321-200402.chr1.NT_079484.1_3526547 C/T 2 rs10908530 0 1 157106923 NT_004487.20 13922336
ss18069727 SC-CHR1_NA11321-200402.chr1.NT_004668.16_214683 A/G 2 rs12021510 0 1 161739421 NT_004487.20 18554834
ss18069726 SC-CHR1_NA11321-200402.chr1.NT_004668.16_815785 C/T 4 rs10800465 0 1 162340523 NT_004487.20 19155936
ss18069723 SC-CHR1_NA11321-200402.chr1.NT_004668.16_8902412 A/G 4 rs10737553 0 1 170427799 NT_004487.20 27243212
ss18069717 SC-CHR1_NA11321-200402.chr1.NT_004487.16_12076927 A/G 3 rs10797828 0 1 183059295 NT_004487.20 39874708
ss18069711 SC-CHR1_NA11321-200402.chr1.NT_004487.16_17373646 G/T 3 rs12021506 0 1 188356407 NT_004487.20 45171820
ss18069715 SC-CHR1_NA11321-200402.chr1.NT_004671.15_4398002 C/G 2 rs10801171 0 1 193073886 NT_004487.20 49889299
ss18069713 SC-CHR1_NA11321-200402.chr1.NT_004433.16_477460 C/T 4 rs10797588 0 1 232666365 NT_167186.2 9057430
ss18069706 SC-CHR1_NA11321-200402.chr1.NT_004836.15_1932044 A/C 2 rs10925290 0 1 237010955 NT_167186.2 13402020
ss18069720 SC-CHR1_NA11321-200402.chr1.NT_004836.15_4524934 G/T 2 rs10925924 0 1 239603845 NT_167186.2 15994910
ss18069707 SC-CHR1_NA11321-200402.chr1.NT_004836.15_11877440 A/G 2 rs12021503 0 1 247050774 NT_167186.2 23441839
ss18069704 SC-CHR1_NA11321-200402.chr1.NT_077988.2_22658 A/G 2 rs9658795 0 22 12191789 NT_187337.1 164234
30 of 66070 subsnp's starting at ss18069710. ss# starting at ss