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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR1_NA07340-200402
Submitter Method ID:CHR1_NA07340
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:74645


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18243004 SC-CHR1_NA07340-200402.chr1.NT_004547.16_537883 A/T 2 rs12116421 0 1 4474190 NT_032977.10 3888202
ss18243014 SC-CHR1_NA07340-200402.chr1.NT_004547.16_1057983 C/T 2 rs12116428 0 1 4994290 NT_032977.10 4408302
ss18243000 SC-CHR1_NA07340-200402.chr1.NT_004547.16_1279030 A/C 3 rs10799183 0 1 5215337 NT_032977.10 4629349
ss18243003 SC-CHR1_NA07340-200402.chr1.NT_004873.15_1167240 C/T 2 rs12116420 0 1 14463579 NT_032977.10 13877591
ss18243011 SC-CHR1_NA07340-200402.chr1.NT_004511.16_1252586 A/G 2 rs10753238 0 1 30841338 NT_032977.10 30255350
ss18243026 SC-CHR1_NA07340-200402.chr1.NT_004511.16_2984031 A/G 2 rs12116436 0 1 32580028 NT_032977.10 31994040
ss18243018 SC-CHR1_NA07340-200402.chr1.NT_032977.6_4068294 C/T 2 rs12116430 0 1 41996176 NT_032977.10 41410188
ss18243024 SC-CHR1_NA07340-200402.chr1.NT_032977.6_9436106 A/G 2 rs12116434 0 1 47407364 NT_032977.10 46821376
ss18243020 SC-CHR1_NA07340-200402.chr1.NT_032977.6_12512795 A/T 2 rs12116432 0 1 50484052 NT_032977.10 49898064
ss18243012 SC-CHR1_NA07340-200402.chr1.NT_032977.6_31333873 A/C 5 rs10889805 0 1 69305121 NT_032977.10 68719133
ss18243006 SC-CHR1_NA07340-200402.chr1.NT_026943.13_4191132 A/G 2 rs12116422 0 1 78905273 NT_032977.10 78319285
ss18243028 SC-CHR1_NA07340-200402.chr1.NT_004686.16_1296713 A/T 4 rs10801697 0 1 88956401 NT_032977.10 88370413
ss18243002 SC-CHR1_NA07340-200402.chr1.NT_004686.16_3552398 C/G 2 rs6428619 0 1 91212324 NT_032977.10 90626336
ss18243022 SC-CHR1_NA07340-200402.chr1.NT_028050.13_9036913 A/G 3 rs10875289 0 1 100382413 NT_032977.10 99796425
ss18243019 SC-CHR1_NA07340-200402.chr1.NT_019273.16_4413697 A/T 2 rs12116431 0 1 112875127 NT_032977.10 112289139
ss18243013 SC-CHR1_NA07340-200402.chr1.NT_032962.5_2677652 A/T 2 rs12116427 0 1 152214821 NT_004487.20 9030234
ss18243025 SC-CHR1_NA07340-200402.chr1.NT_032962.5_2677694 C/T 2 rs12116435 0 1 152214863 NT_004487.20 9030276
ss18243015 SC-CHR1_NA07340-200402.chr1.NT_079484.1_3526547 C/T 3 rs10908530 0 1 157106923 NT_004487.20 13922336
ss18243021 SC-CHR1_NA07340-200402.chr1.NT_079484.1_6033315 C/T 2 rs12116433 0 1 159613693 NT_004487.20 16429106
ss18243001 SC-CHR1_NA07340-200402.chr1.NT_004668.16_5449745 A/T 2 rs12116418 0 1 166975036 NT_004487.20 23790449
ss18243008 SC-CHR1_NA07340-200402.chr1.NT_004668.16_8691826 A/G 2 rs12116424 0 1 170217213 NT_004487.20 27032626
ss18243017 SC-CHR1_NA07340-200402.chr1.NT_004671.15_4398002 C/G 2 rs10801171 0 1 193073886 NT_004487.20 49889299
ss18243027 SC-CHR1_NA07340-200402.chr1.NT_021877.16_3355824 A/G 2 rs12116437 0 1 209723682 NT_004487.20 66539095
ss18243010 SC-CHR1_NA07340-200402.chr1.NT_021877.16_15432347 A/G 5 rs12116426 0 1 221823306 NT_004487.20 78638719
ss18242999 SC-CHR1_NA07340-200402.chr1.NT_004433.16_628214 A/G 2 rs12116417 0 1 232817119 NT_167186.2 9208184
ss18243009 SC-CHR1_NA07340-200402.chr1.NT_004433.16_1238577 C/T 2 rs12116425 0 1 233427482 NT_167186.2 9818547
ss18243016 SC-CHR1_NA07340-200402.chr1.NT_004433.16_2453161 A/G 2 rs635534 0 1 234642066 NT_167186.2 11033131
ss18243023 SC-CHR1_NA07340-200402.chr1.NT_004836.15_4524934 G/T 2 rs10925924 0 1 239603845 NT_167186.2 15994910
ss18243007 SC-CHR1_NA07340-200402.chr1.NT_004836.15_11412332 C/T 3 rs12116423 0 1 246585666 NT_167186.2 22976731
ss18243005 SC-CHR1_NA07340-200402.chr1.NT_077988.2_22658 A/G 2 rs9658795 0 22 12191789 NT_187337.1 164234
30 of 74645 subsnp's starting at ss18243004. ss# starting at ss