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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR22_NA11321-200402
Submitter Method ID:CHR22_NA11321
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:4916


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18323107 SC-CHR22_NA11321-200402.chr1.NT_032977.6_28400101 A/G 2 rs12161179 0 1 66371348 NT_032977.10 65785360
ss18323083 SC-CHR22_NA11321-200402.chr1.NT_026943.13_2068992 C/G 2 rs10735746 0 1 76783133 NT_032977.10 76197145
ss18323088 SC-CHR22_NA11321-200402.chr1.NT_079484.1_7115703 A/T 2 rs12161166 0 1 160696081 NT_004487.20 17511494
ss18323098 SC-CHR22_NA11321-200402.chr1.NT_021877.16_12542456 A/G 2 rs10746381 0 1 218933208 NT_004487.20 75748621
ss18323084 SC-CHR22_NA11321-200402.chr1.NT_022052.2_37417 C/G 3 rs6541593 0 11 8493489 NT_009237.19 8433489
ss18323091 SC-CHR22_NA11321-200402.chr1.NT_077988.2_25448 A/G 3 rs369327873 0 21 9313745 NT_113953.1 67658
ss18323103 SC-CHR22_NA11321-200402.chr1.NT_022052.2_19843 A/C 4 rs12161175 0 22 11484760 NT_167227.2 56704
ss18323079 SC-CHR22_NA11321-200402.chr1.NT_022052.2_145410 A/G 2 rs757414422 0 22 12043503 NT_187337.1 15948
ss18323081 SC-CHR22_NA11321-200402.chr1.NT_077988.2_77714 A/G 4 rs12161163 0 22 12136744 NT_187337.1 109189
ss18323094 SC-CHR22_NA11321-200402.chr1.NT_077988.2_59582 C/T 3 rs12161169 0 22 12154876 NT_187337.1 127321
ss18323089 SC-CHR22_NA11321-200402.chr1.NT_077988.2_32206 C/T 3 rs9658958 0 22 12182241 NT_187337.1 154686
ss18323086 SC-CHR22_NA11321-200402.chr1.NT_077988.2_32059 G/T 2 rs10453942 0 22 12182388 NT_187337.1 154833
ss18323085 SC-CHR22_NA11321-200402.chr1.NT_077988.2_32016 G/T 3 rs9658934 0 22 12182431 NT_187337.1 154876
ss18323097 SC-CHR22_NA11321-200402.chr1.NT_077988.2_25910 A/G 3 rs10443758 0 22 12188537 NT_187337.1 160982
ss18323095 SC-CHR22_NA11321-200402.chr1.NT_077988.2_1119 A/G 2 rs12161170 0 22 12721170 NT_167229.1 29440
ss18323082 SC-CHR22_NA11321-200402.chr1.NT_077930.1_179045 A/C 2 rs12161164 0 6 103526838 NT_025741.16 43296904
ss18323087 SC-CHR22_NA11321-200402.chr1.NT_077988.2_25124 A/C 3 N.D. N.D.
ss18323096 SC-CHR22_NA11321-200402.chr1.NT_077988.2_25801 A/C 5 N.D. N.D.
ss18323101 SC-CHR22_NA11321-200402.chr1.NT_077988.2_147309 A/C 2 N.D. N.D.
ss18323078 SC-CHR22_NA11321-200402.chr1.NT_077930.1_78928 C/T 6 rs4094731 0 N.D. N.D.
ss18323080 SC-CHR22_NA11321-200402.chr1.NT_077930.1_42364 C/G 2 rs4847982 1 N.D. N.D.
ss18323093 SC-CHR22_NA11321-200402.chr1.NT_077930.1_97676 C/G 3 rs6604499 0 N.D. N.D.
ss18323090 SC-CHR22_NA11321-200402.chr1.NT_077387.2_172244 C/T 2 rs12161167 0 N.D. N.D.
ss18323099 SC-CHR22_NA11321-200402.chr1.NT_077387.2_7084 A/C 2 rs12161171 0 N.D. N.D.
ss18323100 SC-CHR22_NA11321-200402.chr1.NT_077930.1_134573 A/G 2 rs12161172 0 N.D. N.D.
ss18323102 SC-CHR22_NA11321-200402.chr1.NT_077930.1_79347 C/T 3 rs12161174 0 N.D. N.D.
ss18323104 SC-CHR22_NA11321-200402.chr1.NT_077930.1_79477 C/T 2 rs12161176 0 N.D. N.D.
ss18323105 SC-CHR22_NA11321-200402.chr1.NT_077387.2_7784 C/T 4 rs12161177 0 N.D. N.D.
ss18323106 SC-CHR22_NA11321-200402.chr1.NT_077387.2_107672 A/T 2 rs12161178 0 N.D. N.D.
ss18323092 SC-CHR22_NA11321-200402.chr1.NT_077387.2_15393 C/G 2 rs879214913 0 N.D. N.D.
30 of 4916 subsnp's starting at ss18323107. ss# starting at ss