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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR22_NA17119-200402
Submitter Method ID:CHR22_NA17119
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:9291


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18328009 SC-CHR6_NA17119-200402.chr1.NT_021937.16_3465112 A/G 2 rs12164480 0 1 9277994 NT_032977.10 8692006
ss18328018 SC-CHR6_NA17119-200402.chr1.NT_077383.3_1191714 C/T 2 rs10903036 0 1 25229181 NT_032977.10 24643193
ss18327995 SC-CHR6_NA17119-200402.chr1.NT_032977.6_20831942 C/T 2 rs12164471 0 1 58803200 NT_032977.10 58217212
ss18328008 SC-CHR6_NA17119-200402.chr1.NT_028050.13_4016284 A/G 2 rs12164479 0 1 95352906 NT_032977.10 94766918
ss18328017 SC-CHR6_NA17119-200402.chr1.NT_004754.15_4074710 A/G 3 rs10802123 0 1 119616502 NT_032977.10 119030514
ss18328006 SC-CHR6_NA17119-200402.chr1.NT_004668.16_5461110 A/G 2 rs10918605 0 1 166986401 NT_004487.20 23801814
ss18328010 SC-CHR6_NA17119-200402.chr1.NT_004487.16_12749018 A/G 2 rs10752915 0 1 183731386 NT_004487.20 40546799
ss18328007 SC-CHR6_NA17119-200402.chr1.NT_077988.2_25448 A/G 3 rs369327873 0 21 9313745 NT_113953.1 67658
ss18328011 SC-CHR6_NA17119-200402.chr1.NT_077988.2_25622 A/C 4 rs9658989 0 21 9313919 NT_113953.1 67832
ss18327999 SC-CHR6_NA17119-200402.chr1.NT_077988.2_156452 A/G 2 rs12164475 0 22 12058002 NT_187337.1 30447
ss18328023 SC-CHR6_NA17119-200402.chr1.NT_077988.2_155208 C/T 2 rs12164483 0 22 12059246 NT_187337.1 31691
ss18328005 SC-CHR6_NA17119-200402.chr1.NT_077988.2_32206 C/T 2 rs9658958 0 22 12182241 NT_187337.1 154686
ss18328002 SC-CHR6_NA17119-200402.chr1.NT_077988.2_32016 G/T 4 rs9658934 0 22 12182431 NT_187337.1 154876
ss18328016 SC-CHR6_NA17119-200402.chr1.NT_077988.2_31828 A/C 3 rs9659226 0 22 12182619 NT_187337.1 155064
ss18327998 SC-CHR6_NA17119-200402.chr1.NT_077988.2_30779 A/G 2 rs12164474 0 22 12183668 NT_187337.1 156113
ss18328021 SC-CHR6_NA17119-200402.chr1.NT_077988.2_26826 A/C 4 rs9659325 0 22 12187621 NT_187337.1 160066
ss18328020 SC-CHR6_NA17119-200402.chr1.NT_077988.2_26679 A/G 2 rs10443766 0 22 12187768 NT_187337.1 160213
ss18327994 SC-CHR6_NA17119-200402.chr1.NT_077988.2_22824 C/G 3 rs12164470 0 22 12191623 NT_187337.1 164068
ss18328015 SC-CHR6_NA17119-200402.chr1.NT_077988.2_18551 G/T 2 rs879133110 0 22 12195896 NT_187337.1 168341
ss18328014 SC-CHR6_NA17119-200402.chr1.NT_077988.2_18243 G/T 2 rs879024966 0 22 12196204 NT_187337.1 168649
ss18328001 SC-CHR6_NA17119-200402.chr1.NT_077988.2_17874 C/G 2 rs879199396 0 22 12196573 NT_187337.1 169018
ss18328003 SC-CHR6_NA17119-200402.chr1.NT_077988.2_25124 A/C 4 N.D. N.D.
ss18328013 SC-CHR6_NA17119-200402.chr1.NT_077988.2_25801 A/C 5 N.D. N.D.
ss18327996 SC-CHR6_NA17119-200402.chr1.NT_022052.2_140238 C/T 2 rs3122991 1 N.D. N.D.
ss18328012 SC-CHR6_NA17119-200402.chr1.NT_077930.1_97676 C/G 3 rs6604499 0 N.D. N.D.
ss18328000 SC-CHR6_NA17119-200402.chr1.NT_077988.2_17869 A/G 2 rs9658921 0 N.D. N.D.
ss18328022 SC-CHR6_NA17119-200402.chr1.NT_077387.2_9912 A/C 2 rs11249338 0 N.D. N.D.
ss18327997 SC-CHR6_NA17119-200402.chr1.NT_022052.2_140288 A/T 2 rs11497411 1 N.D. N.D.
ss18328004 SC-CHR6_NA17119-200402.chr1.NT_077930.1_42922 A/G 2 rs12164478 0 N.D. N.D.
ss18328019 SC-CHR6_NA17119-200402.chr1.NT_077988.2_26633 A/C 4 rs878999889 0 N.D. N.D.
30 of 9291 subsnp's starting at ss18328009. ss# starting at ss