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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR9-12_NA11321-200402
Submitter Method ID:CHR9-12_NA11321
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:202628


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18404527 SC-CHR9-12_NA11321-200402.chr1.NT_077914.2_120150 C/T 2 rs11260605 0 1 1509298 NT_032977.10 923310
ss18404523 SC-CHR9-12_NA11321-200402.chr1.NT_004547.16_1221277 A/G 2 rs10799174 0 1 5157584 NT_032977.10 4571596
ss18404522 SC-CHR9-12_NA11321-200402.chr1.NT_021937.16_6300478 C/T 3 rs11121872 0 1 12113362 NT_032977.10 11527374
ss18404544 SC-CHR9-12_NA11321-200402.chr1.NT_004873.15_746894 A/G 2 rs10732306 0 1 14043234 NT_032977.10 13457246
ss18404534 SC-CHR9-12_NA11321-200402.chr1.NT_030584.10_25979 A/G 2 rs10749614 0 1 16875142 NT_032977.10 16289154
ss18404532 SC-CHR9-12_NA11321-200402.chr1.NT_004610.16_2902190 C/T 2 rs10917041 0 1 21772447 NT_032977.10 21186459
ss18404550 SC-CHR9-12_NA11321-200402.chr1.NT_079482.1_2614555 A/G 2 rs11264056 0 1 37447208 NT_032977.10 36861220
ss18404528 SC-CHR9-12_NA11321-200402.chr1.NT_032977.6_18135270 A/G 2 rs10888954 0 1 56106527 NT_032977.10 55520539
ss18404543 SC-CHR9-12_NA11321-200402.chr1.NT_026943.13_4439295 C/G 2 rs10874024 0 1 79153436 NT_032977.10 78567448
ss18404539 SC-CHR9-12_NA11321-200402.chr1.NT_004754.15_1339386 A/C 2 rs10923155 0 1 116881179 NT_032977.10 116295191
ss18404538 SC-CHR9-12_NA11321-200402.chr1.NT_004668.16_1431555 A/G 2 rs10799890 0 1 162956293 NT_004487.20 19771706
ss18404535 SC-CHR9-12_NA11321-200402.chr1.NT_004668.16_3197259 A/G 2 rs10753644 0 1 164722550 NT_004487.20 21537963
ss18404521 SC-CHR9-12_NA11321-200402.chr1.NT_004668.16_8006401 C/G 2 rs10800452 0 1 169531691 NT_004487.20 26347104
ss18404533 SC-CHR9-12_NA11321-200402.chr1.NT_004487.16_9218858 C/T 2 rs10913946 0 1 180201226 NT_004487.20 37016639
ss18404524 SC-CHR9-12_NA11321-200402.chr1.NT_004671.15_5160388 A/G 2 rs10921445 0 1 193836272 NT_004487.20 50651685
ss18404531 SC-CHR9-12_NA11321-200402.chr1.NT_004671.15_6586564 C/G 2 rs10733083 0 1 195262448 NT_004487.20 52077861
ss18404541 SC-CHR9-12_NA11321-200402.chr1.NT_004671.15_14150809 C/T 2 rs10753920 0 1 202826697 NT_004487.20 59642110
ss18404540 SC-CHR9-12_NA11321-200402.chr1.NT_034410.5_2009167 G/T 2 rs10900516 0 1 205613358 NT_004487.20 62428771
ss18404537 SC-CHR9-12_NA11321-200402.chr1.NT_021877.16_11864007 A/C 2 rs10863384 0 1 218254759 NT_004487.20 75070172
ss18404548 SC-CHR9-12_NA11321-200402.chr1.NT_021877.16_11952151 G/T 2 rs10863393 0 1 218342903 NT_004487.20 75158316
ss18404536 SC-CHR9-12_NA11321-200402.chr1.NT_021877.16_13603091 C/G 2 rs10779393 0 1 219994050 NT_004487.20 76809463
ss18404529 SC-CHR9-12_NA11321-200402.chr1.NT_021877.16_14117454 A/G 2 rs10779409 0 1 220508413 NT_004487.20 77323826
ss18404526 SC-CHR9-12_NA11321-200402.chr1.NT_004559.11_219311 A/G 3 rs10915882 0 1 223855415 NT_167186.2 246480
ss18404530 SC-CHR9-12_NA11321-200402.chr1.NT_004559.11_2990955 A/G 2 rs10737424 0 1 226627060 NT_167186.2 3018125
ss18404545 SC-CHR9-12_NA11321-200402.chr1.NT_004433.16_1470188 C/T 2 rs10732966 0 1 233659093 NT_167186.2 10050158
ss18404542 SC-CHR9-12_NA11321-200402.chr1.NT_004836.15_196476 A/G 2 rs10802583 0 1 235275372 NT_167186.2 11666437
ss18404547 SC-CHR9-12_NA11321-200402.chr1.NT_004836.15_4455288 A/G 2 rs10802772 0 1 239534199 NT_167186.2 15925264
ss18404525 SC-CHR9-12_NA11321-200402.chr1.NT_004836.15_9206958 A/G 2 rs10803212 0 1 244380292 NT_167186.2 20771357
ss18404549 SC-CHR9-12_NA11321-200402.chr1.NT_077988.2_32016 G/T 3 rs9658934 0 22 12182431 NT_187337.1 154876
ss18404546 SC-CHR9-12_NA11321-200402.chr1.NT_022052.2_137619 C/T 2 rs11122651 0 N.D. N.D.
30 of 202628 subsnp's starting at ss18404527. ss# starting at ss