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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR9-12_NA07340-200402
Submitter Method ID:CHR9-12_NA07340
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:200926


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss18857932 SC-CHR9-12_NA07340-200402.chr1.NT_021937.16_3246281 C/G 2 rs12353933 0 1 9059163 NT_032977.10 8473175
ss18857933 SC-CHR9-12_NA07340-200402.chr1.NT_021937.16_3246299 C/T 2 rs12353934 0 1 9059181 NT_032977.10 8473193
ss18857941 SC-CHR9-12_NA07340-200402.chr1.NT_021937.16_7015542 C/T 2 rs11122003 0 1 12857084 NT_032977.10 12271096
ss18857942 SC-CHR9-12_NA07340-200402.chr1.NT_021937.16_7015664 C/T 2 rs11122007 0 1 12857206 NT_032977.10 12271218
ss18857939 SC-CHR9-12_NA07340-200402.chr1.NT_004511.16_786512 C/T 2 rs10915094 0 1 30375264 NT_032977.10 29789276
ss18857945 SC-CHR9-12_NA07340-200402.chr1.NT_004511.16_786829 C/T 2 rs12353938 0 1 30375581 NT_032977.10 29789593
ss18857946 SC-CHR9-12_NA07340-200402.chr1.NT_004511.16_4544200 C/T 2 rs10753299 0 1 34140196 NT_032977.10 33554208
ss18857954 SC-CHR9-12_NA07340-200402.chr1.NT_079482.1_2482570 A/G 2 rs10796904 0 1 37315223 NT_032977.10 36729235
ss18857951 SC-CHR9-12_NA07340-200402.chr1.NT_032977.6_18572260 C/T 2 rs10789026 0 1 56543517 NT_032977.10 55957529
ss18857950 SC-CHR9-12_NA07340-200402.chr1.NT_032977.6_26257547 G/T 2 rs12353939 0 1 64228794 NT_032977.10 63642806
ss18857940 SC-CHR9-12_NA07340-200402.chr1.NT_032977.6_30608034 A/C 2 rs12353936 0 1 68579282 NT_032977.10 67993294
ss18857953 SC-CHR9-12_NA07340-200402.chr1.NT_026943.13_7511730 C/G 2 rs11163441 0 1 82225872 NT_032977.10 81639884
ss18857943 SC-CHR9-12_NA07340-200402.chr1.NT_028050.13_3739569 C/T 2 rs12353937 0 1 95076191 NT_032977.10 94490203
ss18857947 SC-CHR9-12_NA07340-200402.chr1.NT_028050.13_8385134 A/G 2 rs11166310 0 1 99730634 NT_032977.10 99144646
ss18857959 SC-CHR9-12_NA07340-200402.chr1.NT_029860.11_3345315 C/T 2 rs9970020 0 1 106726582 NT_032977.10 106140594
ss18857948 SC-CHR9-12_NA07340-200402.chr1.NT_019273.16_4340247 A/G 2 rs10745336 0 1 112801677 NT_032977.10 112215689
ss18857931 SC-CHR9-12_NA07340-200402.chr1.NT_032962.5_3544000 A/T 2 rs11205188 0 1 153081169 NT_004487.20 9896582
ss18857936 SC-CHR9-12_NA07340-200402.chr1.NT_079484.1_1103536 C/T 2 rs10737169 0 1 154681228 NT_004487.20 11496641
ss18857935 SC-CHR9-12_NA07340-200402.chr1.NT_004487.16_8383431 G/T 2 rs10798670 0 1 179365799 NT_004487.20 36181212
ss18857952 SC-CHR9-12_NA07340-200402.chr1.NT_004487.16_10492579 C/T 2 rs12353940 0 1 181474946 NT_004487.20 38290359
ss18857937 SC-CHR9-12_NA07340-200402.chr1.NT_004671.15_5279694 C/T 2 rs12353935 0 1 193955578 NT_004487.20 50770991
ss18857944 SC-CHR9-12_NA07340-200402.chr1.NT_021877.16_3695019 A/C 2 rs10779520 0 1 210062877 NT_004487.20 66878290
ss18857938 SC-CHR9-12_NA07340-200402.chr1.NT_021877.16_4276605 C/G 2 rs11119556 0 1 210644464 NT_004487.20 67459877
ss18857934 SC-CHR9-12_NA07340-200402.chr1.NT_021877.16_9307179 A/G 2 rs11120607 0 1 215697931 NT_004487.20 72513344
ss18857958 SC-CHR9-12_NA07340-200402.chr1.NT_021877.16_14244620 C/T 2 rs10746403 0 1 220635579 NT_004487.20 77450992
ss18857957 SC-CHR9-12_NA07340-200402.chr1.NT_004559.11_501190 A/G 2 rs10737433 0 1 224137294 NT_167186.2 528359
ss18857949 SC-CHR9-12_NA07340-200402.chr1.NT_004836.15_1552730 A/C 2 rs10754579 0 1 236631641 NT_167186.2 13022706
ss18857930 SC-CHR9-12_NA07340-200402.chr1.NT_004836.15_3643782 C/T 2 rs12353932 0 1 238722693 NT_167186.2 15113758
ss18857956 SC-CHR9-12_NA07340-200402.chr1.NT_031730.8_640306 C/T 2 rs10888374 0 1 248337013 NT_167186.2 24728078
ss18857955 SC-CHR9-12_NA07340-200402.chr1.NT_077988.2_25424 A/G 2 rs9724865 0 22 12189023 NT_187337.1 161468
30 of 200926 subsnp's starting at ss18857932. ss# starting at ss