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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHRX_NA11321-200402
Submitter Method ID:CHRX_NA11321
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:9833


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss19058871 SC-CHRX_NA11321-200402.chr1.NT_079482.1_1481319 C/T 2 rs10908296 0 1 36313972 NT_032977.10 35727984
ss19058873 SC-CHRX_NA11321-200402.chr1.NT_032977.6_8804905 A/T 2 rs9633362 0 1 46776163 NT_032977.10 46190175
ss19058874 SC-CHRX_NA11321-200402.chr1.NT_032977.6_8804911 A/T 2 rs9633363 0 1 46776169 NT_032977.10 46190181
ss19058875 SC-CHRX_NA11321-200402.chr1.NT_032977.6_8804918 A/T 2 rs9633364 0 1 46776176 NT_032977.10 46190188
ss19058866 SC-CHRX_NA11321-200402.chr1.NT_026943.13_201810 A/C 3 rs9633425 0 1 74915952 NT_032977.10 74329964
ss19058862 SC-CHRX_NA11321-200402.chr1.NT_028050.13_331441 G/T 2 rs12380987 0 1 91668062 NT_032977.10 91082074
ss19058885 SC-CHRX_NA11321-200402.chr1.NT_032962.5_3079998 C/G 2 rs11205042 0 1 152617167 NT_004487.20 9432580
ss19058882 SC-CHRX_NA11321-200402.chr1.NT_004487.16_12685206 C/T 2 rs9633303 0 1 183667574 NT_004487.20 40482987
ss19058876 SC-CHRX_NA11321-200402.chr1.NT_004487.16_12685375 A/T 2 rs9633304 0 1 183667743 NT_004487.20 40483156
ss19058864 SC-CHRX_NA11321-200402.chr1.NT_004487.16_12686782 C/G 2 rs9633305 0 1 183669150 NT_004487.20 40484563
ss19058884 SC-CHRX_NA11321-200402.chr1.NT_004487.16_12686849 C/T 2 rs9633306 0 1 183669217 NT_004487.20 40484630
ss19058881 SC-CHRX_NA11321-200402.chr1.NT_004671.15_2760893 A/T 2 rs9633350 0 1 191436777 NT_004487.20 48252190
ss19058863 SC-CHRX_NA11321-200402.chr1.NT_004671.15_8729161 G/T 2 rs10922217 0 1 197405045 NT_004487.20 54220458
ss19058877 SC-CHRX_NA11321-200402.chr1.NT_004671.15_8729175 C/T 2 rs12380994 0 1 197405059 NT_004487.20 54220472
ss19058856 SC-CHRX_NA11321-200402.chr1.NT_004671.15_8729524 C/T 2 rs10922218 0 1 197405408 NT_004487.20 54220821
ss19058878 SC-CHRX_NA11321-200402.chr1.NT_004671.15_8729648 C/T 2 rs12380995 0 12 54488804 NT_029419.13 17253552
ss19058880 SC-CHRX_NA11321-200402.chr1.NT_077988.2_25286 C/G 2 rs10907430 0 21 9313583 NT_113953.1 67496
ss19058872 SC-CHRX_NA11321-200402.chr1.NT_077988.2_37610 A/C 2 rs9700771 0 22 12176840 NT_187337.1 149285
ss19058857 SC-CHRX_NA11321-200402.chr1.NT_077988.2_32016 G/T 2 rs9658934 0 22 12182431 NT_187337.1 154876
ss19058870 SC-CHRX_NA11321-200402.chr1.NT_077988.2_14919 C/G 2 rs12380990 0 22 12199528 NT_187337.1 171973
ss19058867 SC-CHRX_NA11321-200402.chr1.NT_077988.2_13798 A/C 2 rs9803779 0 22 12200649 NT_187337.1 173094
ss19058858 SC-CHRX_NA11321-200402.chr1.NT_077988.2_25124 A/C 2 N.D. N.D.
ss19058859 SC-CHRX_NA11321-200402.chr1.NT_032977.6_33918391 C/T 2 N.D. N.D.
ss19058860 SC-CHRX_NA11321-200402.chr1.NT_032977.6_33918613 C/T 2 N.D. N.D.
ss19058861 SC-CHRX_NA11321-200402.chr1.NT_032977.6_33918887 C/G 2 N.D. N.D.
ss19058865 SC-CHRX_NA11321-200402.chr1.NT_022071.12_85695 A/G 2 N.D. N.D.
ss19058868 SC-CHRX_NA11321-200402.chr1.NT_022071.12_33682 C/T 2 N.D. N.D.
ss19058869 SC-CHRX_NA11321-200402.chr1.NT_022071.12_33836 G/T 2 N.D. N.D.
ss19058879 SC-CHRX_NA11321-200402.chr1.NT_077988.2_25015 A/C 2 N.D. N.D.
ss19058883 SC-CHRX_NA11321-200402.chr1.NT_022071.12_33784 C/T 2 N.D. N.D.
30 of 9833 subsnp's starting at ss19058871. ss# starting at ss