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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHRX_NA17119-200402
Submitter Method ID:CHRX_NA17119
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:18125


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss19068714 SC-CHRX_NA17119-200402.chr1.NT_021937.16_1693031 C/G 2 rs2462928 0 1 7505912 NT_032977.10 6919924
ss19068691 SC-CHRX_NA17119-200402.chr1.NT_004873.15_2310097 A/T 2 rs12385690 0 1 15606437 NT_032977.10 15020449
ss19068703 SC-CHRX_NA17119-200402.chr1.NT_077920.2_576954 C/T 2 rs10907263 0 1 16686719 NT_032977.10 16100731
ss19068708 SC-CHRX_NA17119-200402.chr1.NT_004610.16_461066 C/T 2 rs12385702 0 1 19331322 NT_032977.10 18745334
ss19068692 SC-CHRX_NA17119-200402.chr1.NT_077383.3_161327 C/T 2 rs10903049 0 1 24198612 NT_032977.10 23612624
ss19068699 SC-CHRX_NA17119-200402.chr1.NT_032977.6_8381906 C/T 2 rs12385696 0 1 46353164 NT_032977.10 45767176
ss19068700 SC-CHRX_NA17119-200402.chr1.NT_032977.6_8381968 C/T 2 rs12385697 0 1 46353226 NT_032977.10 45767238
ss19068696 SC-CHRX_NA17119-200402.chr1.NT_032977.6_8381991 A/C 2 rs12385693 0 1 46353249 NT_032977.10 45767261
ss19068698 SC-CHRX_NA17119-200402.chr1.NT_032977.6_8382091 A/G 2 rs12385695 0 1 46353349 NT_032977.10 45767361
ss19068704 SC-CHRX_NA17119-200402.chr1.NT_032977.6_31628220 C/T 2 rs12385700 0 1 69599468 NT_032977.10 69013480
ss19068710 SC-CHRX_NA17119-200402.chr1.NT_032977.6_32910727 A/G 2 rs12385704 0 1 70881975 NT_032977.10 70295987
ss19068697 SC-CHRX_NA17119-200402.chr1.NT_028050.13_790679 C/T 2 rs12385694 0 1 92127300 NT_032977.10 91541312
ss19068694 SC-CHRX_NA17119-200402.chr1.NT_028050.13_792722 A/G 2 rs12385692 0 1 92129343 NT_032977.10 91543355
ss19068713 SC-CHRX_NA17119-200402.chr1.NT_029860.11_975774 C/T 2 rs11185447 0 1 104357062 NT_032977.10 103771074
ss19068695 SC-CHRX_NA17119-200402.chr1.NT_032962.5_3719627 C/T 2 rs10888543 0 1 153256796 NT_004487.20 10072209
ss19068712 SC-CHRX_NA17119-200402.chr1.NT_079484.1_5006857 C/T 2 rs12385706 0 1 158587235 NT_004487.20 15402648
ss19068715 SC-CHRX_NA17119-200402.chr1.NT_004668.16_2031297 A/G 2 rs10737493 0 1 163556035 NT_004487.20 20371448
ss19068693 SC-CHRX_NA17119-200402.chr1.NT_004487.16_3765652 A/G 2 rs12385691 0 1 174748022 NT_004487.20 31563435
ss19068717 SC-CHRX_NA17119-200402.chr1.NT_004487.16_8386626 A/G 3 rs12385707 0 1 179368994 NT_004487.20 36184407
ss19068707 SC-CHRX_NA17119-200402.chr1.NT_004487.16_14130071 A/G 2 rs12385701 0 1 185112442 NT_004487.20 41927855
ss19068716 SC-CHRX_NA17119-200402.chr1.NT_004671.15_740630 C/T 2 rs10922017 0 1 189416514 NT_004487.20 46231927
ss19068701 SC-CHRX_NA17119-200402.chr1.NT_004671.15_3826585 C/T 2 rs12385698 0 1 192502469 NT_004487.20 49317882
ss19068690 SC-CHRX_NA17119-200402.chr1.NT_004671.15_9906234 C/T 2 rs9651069 0 1 198582120 NT_004487.20 55397533
ss19068702 SC-CHRX_NA17119-200402.chr1.NT_004671.15_12934294 C/T 2 rs12385699 0 1 201610182 NT_004487.20 58425595
ss19068718 SC-CHRX_NA17119-200402.chr1.NT_021877.16_4350414 C/T 2 rs11119578 0 1 210718275 NT_004487.20 67533688
ss19068689 SC-CHRX_NA17119-200402.chr1.NT_004559.11_6155627 A/G 2 rs12385688 0 1 229857106 NT_167186.2 6248171
ss19068709 SC-CHRX_NA17119-200402.chr1.NT_004671.15_3827002 C/G 2 rs12385703 0 9 83053267 NT_008470.20 14832715
ss19068705 SC-CHRX_NA17119-200402.chr1.NT_077988.2_12233 C/G 2 rs9659737 0 N.D. N.D.
ss19068706 SC-CHRX_NA17119-200402.chr1.NT_077988.2_12272 C/T 2 rs9659739 0 N.D. N.D.
ss19068711 SC-CHRX_NA17119-200402.chr1.NT_077930.1_187216 C/T 2 rs12385705 0 N.D. N.D.
30 of 18125 subsnp's starting at ss19068714. ss# starting at ss