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View SNP Submission Batch
Submitter Handle:SC_SNP
Submitter Batch ID:SC-CHR13_NA11321-200402
Submitter Method ID:CHR13_NA11321
Citation:SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:3841


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss19825519 SC-CHR13_NA11321-200402.chr1.NT_032977.6_7784687 A/G 2 rs10430124 0 1 45755945 NT_032977.10 45169957
ss19825508 SC-CHR13_NA11321-200402.chr1.NT_077988.2_25622 A/C 2 rs9658989 0 21 9313919 NT_113953.1 67832
ss19825531 SC-CHR13_NA11321-200402.chr1.NT_077988.2_73135 C/T 3 rs10430433 0 22 12141323 NT_187337.1 113768
ss19825527 SC-CHR13_NA11321-200402.chr1.NT_077988.2_72727 C/T 3 rs9699974 0 22 12141731 NT_187337.1 114176
ss19825529 SC-CHR13_NA11321-200402.chr1.NT_077988.2_31872 A/G 2 rs9660003 0 22 12182575 NT_187337.1 155020
ss19825528 SC-CHR13_NA11321-200402.chr1.NT_077988.2_31672 A/G 2 rs10430390 0 22 12182775 NT_187337.1 155220
ss19825512 SC-CHR13_NA11321-200402.chr1.NT_077988.2_26826 A/C 3 rs9659325 0 22 12187621 NT_187337.1 160066
ss19825506 SC-CHR13_NA11321-200402.chr1.NT_022071.12_84672 C/T 2 N.D. N.D.
ss19825507 SC-CHR13_NA11321-200402.chr1.NT_077988.2_25124 A/C 2 N.D. N.D.
ss19825509 SC-CHR13_NA11321-200402.chr1.NT_077988.2_25801 A/C 3 N.D. N.D.
ss19825510 SC-CHR13_NA11321-200402.chr1.NT_077988.2_26192 A/C 3 N.D. N.D.
ss19825514 SC-CHR13_NA11321-200402.chr1.NT_077988.2_24516 A/G 2 N.D. N.D.
ss19825516 SC-CHR13_NA11321-200402.chr1.NT_022071.12_84593 A/C 2 N.D. N.D.
ss19825517 SC-CHR13_NA11321-200402.chr1.NT_004487.16_13865423 A/C 2 N.D. N.D.
ss19825523 SC-CHR13_NA11321-200402.chr1.NT_077988.2_12233 C/G 3 N.D. N.D.
ss19825524 SC-CHR13_NA11321-200402.chr1.NT_077988.2_12272 C/T 2 N.D. N.D.
ss19825526 SC-CHR13_NA11321-200402.chr1.NT_022071.12_85695 A/G 2 N.D. N.D.
ss19825532 SC-CHR13_NA11321-200402.chr1.NT_077988.2_73360 C/T 2 N.D. N.D.
ss19825534 SC-CHR13_NA11321-200402.chr1.NT_022071.12_84760 G/T 2 N.D. N.D.
ss19825515 SC-CHR13_NA11321-200402.chr1.NT_077988.2_11363 C/T 2 rs6684023 0 N.D. N.D.
ss19825521 SC-CHR13_NA11321-200402.chr1.NT_077988.2_25120 G/T 2 rs9699939 0 N.D. N.D.
ss19825520 SC-CHR13_NA11321-200402.chr1.NT_077387.2_115289 A/T 2 rs10430176 0 N.D. N.D.
ss19825513 SC-CHR13_NA11321-200402.chr1.NT_077387.2_118767 A/G 2 rs10430179 0 N.D. N.D.
ss19825533 SC-CHR13_NA11321-200402.chr1.NT_077387.2_118895 C/G 3 rs10430181 0 N.D. N.D.
ss19825518 SC-CHR13_NA11321-200402.chr1.NT_077387.2_119079 A/G 3 rs10430182 0 N.D. N.D.
ss19825535 SC-CHR13_NA11321-200402.chr1.NT_077387.2_119485 A/C 2 rs10430185 0 N.D. N.D.
ss19825530 SC-CHR13_NA11321-200402.chr1.NT_077988.2_73091 C/T 3 rs11261444 0 N.D. N.D.
ss19825522 SC-CHR13_NA11321-200402.chr1.NT_077988.2_25258 G/T 2 rs878884533 0 N.D. N.D.
ss19825525 SC-CHR13_NA11321-200402.chr1.NT_077988.2_25737 A/G 2 rs878887626 0 N.D. N.D.
ss19825511 SC-CHR13_NA11321-200402.chr1.NT_077988.2_26633 A/C 4 rs878999889 0 N.D. N.D.
30 of 3841 subsnp's starting at ss19825519. ss# starting at ss