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Method Detail
Submitter Method Handle: PERLEGEN
Submitter Method ID: CHIP_HYB
Submitted method description:
Genomic DNA was PCR amplified with multiplexed primers, and hybridized
to high density oligonucleotide arrays having multiple perfect-match
probes for each of two SNP alleles, for forward and reverse strands,
plus mismatch probes. Chips were stained with streptavidin-Cy-chrome
conjugate and scanned using custom built confocal scanners. Genotypes
were determined based on a cluster analysis of intensity ratios of
perfect-match probes for each allele.

This method was used in the following submission:

Submitter Handle Batch Type Submitter batch id Release build id
PERLEGEN Genotype 08-03 117
PERLEGEN Assay 30-OCT-03 118
PERLEGEN Assay UNI_06-FEB-2007 127
PERLEGEN Assay UNI_04-APR-2007 127