NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
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Method Detail
Submitter Method Handle: GENOMED
Submitter Method ID: SOLID_WHOLE_GENOME
Submitted method description:
DNA sequencing was performed with an ABI SOLiD 5500xl Genetic Analyzer at the National Center for Genomics and Bioinformatics of Chile (http://omics-solutions.cl/). Briefly, DNA was sheared by sonication to fragments with a mean length size of 160 bp and
4 reads across samples was required for variant calling. SNP and small INDEL variants were called for autosomes, X chromosome, and mitochondrial DNA. Variants from HapMap, One Thousand Genomes (1000G release 20110521), and dbSNP v137 were used for calibra

This method was used in the following submission:

Submitter Handle Batch Type Submitter batch id Release build id
GENOMED Assay CLG_Seq18 146