Molecular characterization of an Escherichia coli clinical isolate that produces both metallo-beta-lactamase VIM-2 and extended-spectrum beta-lactamase GES-7: identification of the In8 integron carrying the blaVIM-2 gene

J Antimicrob Chemother. 2006 Aug;58(2):432-3. doi: 10.1093/jac/dkl240. Epub 2006 Jun 2.

Abstract

Objectives: We have previously reported the isolation of a VIM-2-producing Escherichia coli clinical isolate and the coexistence of blaVIM-2 and blaGES-7 in the same isolate. The aim of this study was to elucidate the genetic environment of these genes.

Methods: PCR and sequence analysis were used to identify and analyse the blaVIM-containing integron. The location of the blaVIM-2 and blaGES-7 genes was identified by hybridization experiments on I-CeuI-digested genomic DNA after PFGE.

Results: Only the blaVIM-2 gene has been found on a class I integron, designated In8 (1474 bp). Hybridization with the blaVIM-2, the blaGES-7 and the 16S-23S rRNA probes confirmed the chromosomal location of both genes. The blaVIM-2 probe hybridized with a 710 kb fragment whereas the blaGES-7 probe hybridized with a 144 kb fragment of genomic DNA of the E. coli isolate.

Conclusions: This report provides evidence for the chromosomal location of both blaVIM-2 and blaGES-7 genes carried by an E. coli clinical isolate. In8, containing blaVIM-2, presents an emerging threat of carbapenem resistance among E. coli isolates in Greece.

MeSH terms

  • Chromosomes, Bacterial / genetics
  • DNA, Bacterial / genetics
  • Electrophoresis, Gel, Pulsed-Field
  • Escherichia coli / enzymology
  • Escherichia coli / genetics*
  • Escherichia coli / isolation & purification
  • Escherichia coli Infections / microbiology
  • Escherichia coli Proteins / genetics*
  • Genome, Bacterial / genetics
  • Humans
  • Integrons / genetics*
  • Molecular Probes
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Polymerase Chain Reaction
  • RNA, Ribosomal, 16S / genetics
  • RNA, Ribosomal, 23S / genetics
  • Sequence Analysis, DNA
  • beta-Lactamases / biosynthesis
  • beta-Lactamases / genetics*

Substances

  • DNA, Bacterial
  • Escherichia coli Proteins
  • Molecular Probes
  • RNA, Ribosomal, 16S
  • RNA, Ribosomal, 23S
  • beta-lactamase bla(vim-2)
  • beta-Lactamases

Associated data

  • GENBANK/AY781413