Pathotyping Escherichia coli by using miniaturized DNA microarrays

Appl Environ Microbiol. 2007 Sep;73(17):5692-7. doi: 10.1128/AEM.00419-07. Epub 2007 Jul 13.

Abstract

The detection of virulence determinants harbored by pathogenic Escherichia coli is important for establishing the pathotype responsible for infection. A sensitive and specific miniaturized virulence microarray containing 60 oligonucleotide probes was developed. It detected six E. coli pathotypes and will be suitable in the future for high-throughput use.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • DNA Probes
  • Escherichia coli / classification*
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Escherichia coli / pathogenicity*
  • Escherichia coli Infections / microbiology
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Humans
  • Oligonucleotide Array Sequence Analysis / methods*
  • Polymerase Chain Reaction
  • Sensitivity and Specificity
  • Virulence

Substances

  • DNA Probes
  • Escherichia coli Proteins