The first complete genome sequence of a non-chicken aviadenovirus, proposed to be turkey adenovirus 1

Virus Res. 2010 Nov;153(2):226-33. doi: 10.1016/j.virusres.2010.08.006. Epub 2010 Aug 13.

Abstract

The complete genome sequence of an adenovirus, isolated from turkey and proposed to be turkey adenovirus type 1 (TAdV-1), was determined to extend our knowledge about the genome organisation and phylogeny of aviadenoviruses. The longest adenovirus genome, consisting of 45,412 bp, with the highest G+C content (of 67.55%) known to date, was found. The central part of the TAdV-1 genome has the conserved gene set and arrangement that are characteristic for every other adenovirus analysed to date. This genome core is flanked by the terminal early regions 1 and 4 (E1 and E4). Aviadenovirus-specific genus-common genes were found in these regions, each containing nine such open reading frames (ORFs). Additionally a type-specific novel ORF, designated as ORF50, was found in E4. Phylogenetic analysis as well as the presence of the genus-specific genes, splice sites and protease cleavage sites confirmed the classification of TAdV-1 in the genus Aviadenovirus. Intrageneric analyses of two genus-specific genes demonstrated the distinctness of TAdV-1 from other aviadenoviruses, thus supporting the proposal for the establishment of a new species, Turkey adenovirus B for TAdV-1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Aviadenovirus / genetics*
  • Aviadenovirus / isolation & purification*
  • Base Composition
  • Cluster Analysis
  • DNA, Viral / chemistry*
  • DNA, Viral / genetics*
  • Gene Order
  • Genes, Viral
  • Genome, Viral*
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Sequence Analysis, DNA
  • Turkeys / virology*

Substances

  • DNA, Viral

Associated data

  • GENBANK/GU936707
  • GENBANK/GU936708