(5'S)-8,5'-cyclo-2'-deoxyguanosine is a strong block to replication, a potent pol V-dependent mutagenic lesion, and is inefficiently repaired in Escherichia coli

Biochemistry. 2011 May 17;50(19):3862-5. doi: 10.1021/bi2004944. Epub 2011 Apr 25.

Abstract

8,5'-Cyclopurines, making up an important class of ionizing radiation-induced tandem DNA damage, are repaired only by nucleotide excision repair (NER). They accumulate in NER-impaired cells, as in Cockayne syndrome group B and certain Xeroderma Pigmentosum patients. A plasmid containing (5'S)-8,5'-cyclo-2'-deoxyguanosine (S-cdG) was replicated in Escherichia coli with specific DNA polymerase knockouts. Viability was <1% in the wild-type strain, which increased to 5.5% with SOS. Viability decreased further in a pol II(-) strain, whereas it increased considerably in a pol IV(-) strain. Remarkably, no progeny was recovered from a pol V(-) strain, indicating that pol V is absolutely required for bypassing S-cdG. Progeny analyses indicated that S-cdG is significantly mutagenic, inducing ~34% mutation with SOS. Most mutations were S-cdG → A mutations, though S-cdG → T mutation and deletion of 5'C also occurred. Incisions of purified UvrABC nuclease on S-cdG, S-cdA, and C8-dG-AP on a duplex 51-mer showed that the incision rates are C8-dG-AP > S-cdA > S-cdG. In summary, S-cdG is a major block to DNA replication, highly mutagenic, and repaired slowly in E. coli.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Repair / drug effects
  • DNA Repair / genetics*
  • DNA Repair / radiation effects
  • DNA Replication / drug effects*
  • DNA Replication / genetics
  • DNA Replication / radiation effects
  • DNA-Directed RNA Polymerases / antagonists & inhibitors
  • DNA-Directed RNA Polymerases / chemistry*
  • DNA-Directed RNA Polymerases / genetics*
  • Deoxyguanosine / analogs & derivatives*
  • Deoxyguanosine / chemistry
  • Deoxyguanosine / genetics
  • Deoxyguanosine / toxicity
  • Escherichia coli / drug effects
  • Escherichia coli / genetics*
  • Escherichia coli / radiation effects
  • Mutagenesis / drug effects
  • Mutagenesis / genetics*
  • Mutagenesis / radiation effects
  • SOS Response, Genetics / drug effects
  • SOS Response, Genetics / genetics
  • SOS Response, Genetics / radiation effects

Substances

  • 8,5'-cyclo-2'-deoxyguanosine
  • DNA-Directed RNA Polymerases
  • Deoxyguanosine