Metabolomics annotates ABHD3 as a physiologic regulator of medium-chain phospholipids

Nat Chem Biol. 2011 Sep 18;7(11):763-5. doi: 10.1038/nchembio.659.

Abstract

All organisms, including humans, possess a huge number of uncharacterized enzymes. Here we describe a general cell-based screen for enzyme substrate discovery by untargeted metabolomics and its application to identify the protein α/β-hydrolase domain-containing 3 (ABHD3) as a lipase that selectively cleaves medium-chain and oxidatively truncated phospholipids. Abhd3(-/-) mice possess elevated myristoyl (C14)-phospholipids, including the bioactive lipid C14-lysophosphatidylcholine, confirming the physiological relevance of our substrate assignments.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Gene Expression Regulation / physiology
  • Gene Expression Regulation, Enzymologic
  • HEK293 Cells
  • Humans
  • Hydrolases / genetics
  • Hydrolases / metabolism*
  • Membrane Proteins / genetics
  • Membrane Proteins / metabolism*
  • Metabolomics / methods*
  • Mice
  • Mice, Knockout
  • Phospholipases A2
  • Phospholipids / chemistry
  • Phospholipids / metabolism*
  • Small Molecule Libraries
  • Substrate Specificity

Substances

  • Membrane Proteins
  • Phospholipids
  • Small Molecule Libraries
  • Hydrolases
  • Abhd3 protein, mouse
  • Phospholipases A2

Associated data

  • PubChem-Substance/125092044
  • PubChem-Substance/125092045
  • PubChem-Substance/125092046
  • PubChem-Substance/125092047
  • PubChem-Substance/125092048
  • PubChem-Substance/125092049
  • PubChem-Substance/125092050
  • PubChem-Substance/125092051
  • PubChem-Substance/125092052
  • PubChem-Substance/125092053
  • PubChem-Substance/125092054
  • PubChem-Substance/125092055