The crystal structure of human Argonaute2

Science. 2012 May 25;336(6084):1037-40. doi: 10.1126/science.1221551. Epub 2012 Apr 26.

Abstract

Argonaute proteins form the functional core of the RNA-induced silencing complexes that mediate RNA silencing in eukaryotes. The 2.3 angstrom resolution crystal structure of human Argonaute2 (Ago2) reveals a bilobed molecule with a central cleft for binding guide and target RNAs. Nucleotides 2 to 6 of a heterogeneous mixture of guide RNAs are positioned in an A-form conformation for base pairing with target messenger RNAs. Between nucleotides 6 and 7, there is a kink that may function in microRNA target recognition or release of sliced RNA products. Tandem tryptophan-binding pockets in the PIWI domain define a likely interaction surface for recruitment of glycine-tryptophan-182 (GW182) or other tryptophan-rich cofactors. These results will enable structure-based approaches for harnessing the untapped therapeutic potential of RNA silencing in humans.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acid Sequence
  • Argonaute Proteins / chemistry*
  • Argonaute Proteins / metabolism
  • Base Pairing
  • Binding Sites
  • Crystallography, X-Ray
  • Humans
  • Hydrogen Bonding
  • Hydrophobic and Hydrophilic Interactions
  • MicroRNAs / chemistry
  • MicroRNAs / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Protein Conformation
  • Protein Structure, Tertiary
  • RNA Interference
  • RNA, Messenger / chemistry
  • RNA, Messenger / metabolism
  • RNA, Small Untranslated
  • Tryptophan / chemistry

Substances

  • AGO2 protein, human
  • Argonaute Proteins
  • MicroRNAs
  • RNA, Messenger
  • Tryptophan
  • RNA, Small Untranslated

Associated data

  • PDB/4EI1
  • PDB/4EI3