New alternative promoter in regulation of the Oct-1 human gene transcription

Dokl Biochem Biophys. 2013 Mar-Apr:449:72-4. doi: 10.1134/S160767291302004X. Epub 2013 May 9.

Abstract

For the first time, the presence of a new alternative promoter in the gene of the oct-1 transcription factor from which a previously unknown mRNA isoform Oct-1X, with 5'-terminus different from the previously described isoforms, was demonstrated. The nucleotide sequence of the Oct-1X cDNA was determined and the presence of a long open reading frame which starts with the first ATG codon of the second exon was demonstrated. A protein shortened on its N-terminus is assumed to be the product of a new mRNA isoform. Expression of the new isoform was studied in various human cell lines; the results indicate the ubiquitous nature of the Oct-1X expression. Therefore, in the work, the third alternative promoter of human oct-1 gene (earlier, a ubiquitous promoter U and an inducible tissue-specific promoter L were described) contributing to the fine regulation of mRNA isoform synthesis and formation of structural and functional diversity of Oct-1 protein isoforms in cells was revealed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Exons / genetics
  • Humans
  • Octamer Transcription Factor-1 / genetics*
  • Open Reading Frames / genetics
  • Promoter Regions, Genetic / genetics*
  • Protein Isoforms / genetics
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Transcription, Genetic / genetics*

Substances

  • Octamer Transcription Factor-1
  • Protein Isoforms
  • RNA, Messenger