Nuclear ARVCF protein binds splicing factors and contributes to the regulation of alternative splicing

J Biol Chem. 2014 May 2;289(18):12421-34. doi: 10.1074/jbc.M113.530717. Epub 2014 Mar 18.

Abstract

The armadillo repeat protein ARVCF is a component of adherens junctions. Similar to related proteins, such as p120-catenin and β-catenin, with known signaling functions, localization studies indicate a cytoplasmic and a nuclear pool of ARVCF. We find that ARVCF interacts with different proteins involved in mRNA-processing: the splicing factor SRSF1 (SF2/ASF), the RNA helicase p68 (DDX5), and the heterogeneous nuclear ribonucleoprotein hnRNP H2. All three proteins bind to ARVCF in an RNA-independent manner. Furthermore, ARVCF occurs in large RNA-containing complexes that contain both spliced and unspliced mRNAs of housekeeping genes. By domain analysis, we show that interactions occur via the ARVCF C terminus. Overexpression of ARVCF, p68, SRSF1, and hnRNP H2 induces a significant increase in splicing activity of a reporter mRNA. Upon depletion of ARVCF followed by RNA sequence analysis, several alternatively spliced transcripts are significantly changed. Therefore, we conclude that nuclear ARVCF influences splicing of pre-mRNAs. We hypothesize that ARVCF is involved in alternative splicing, generating proteomic diversity, and its deregulation may contribute to diseased states, such as cancer and neurological disorders.

Keywords: Adherens Junction; Alternative Splicing; Arm Repeat Protein; Catenin; Cell Junctions; Molecular Cell Biology; Post-transcriptional Gene Expression Regulation; Ribonuclear Protein (RNP).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Armadillo Domain Proteins / genetics
  • Armadillo Domain Proteins / metabolism*
  • Binding Sites / genetics
  • Blotting, Western
  • Caco-2 Cells
  • Cell Adhesion Molecules / genetics
  • Cell Adhesion Molecules / metabolism*
  • DEAD-box RNA Helicases / genetics
  • DEAD-box RNA Helicases / metabolism*
  • Gene Expression
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • HEK293 Cells
  • Heterogeneous-Nuclear Ribonucleoprotein Group F-H / genetics
  • Heterogeneous-Nuclear Ribonucleoprotein Group F-H / metabolism*
  • Humans
  • Microscopy, Confocal
  • Mutation
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Phosphoproteins / genetics
  • Phosphoproteins / metabolism*
  • Protein Binding
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • RNA Interference
  • RNA Precursors / genetics
  • RNA, Messenger / genetics
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Serine-Arginine Splicing Factors
  • Two-Hybrid System Techniques

Substances

  • ARVCF protein, human
  • Armadillo Domain Proteins
  • Cell Adhesion Molecules
  • HNRNPH2 protein, human
  • Heterogeneous-Nuclear Ribonucleoprotein Group F-H
  • Nuclear Proteins
  • Phosphoproteins
  • Protein Isoforms
  • RNA Precursors
  • RNA, Messenger
  • RNA-Binding Proteins
  • Green Fluorescent Proteins
  • Serine-Arginine Splicing Factors
  • Ddx5 protein, human
  • DEAD-box RNA Helicases