Papiliotrema siamense f.a., sp. nov., a yeast species isolated from plant leaves

Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3058-3062. doi: 10.1099/ijs.0.065607-0. Epub 2014 Jun 12.

Abstract

Two strains representing a novel species were isolated from the external surface of a sugar cane leaf (DMKU-SP85(T)) and tissue of a rice leaf (DMKU-RE97) collected in Thailand. On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, and sequence analysis of the D1/D2 region of the large subunit (LSU) rRNA gene and the internal transcribed spacer (ITS) region, the two strains were determined to represent a novel species of the genus Papiliotrema although sexual reproduction was not observed. The sequences of the D1/D2 region of the LSU rRNA gene and ITS region of the two strains were identical, but differed from those of the type strain of Cryptococcus nemorosus by 0.6 % nucleotide substitutions (four nucleotide substitutions out of 597 nucleotides) in the D1/D2 region of the LSU rRNA gene and 1.8 % nucleotide substitutions (nine nucleotide substitutions out of 499 nucleotides) in the ITS region. The name Papiliotrema siamense f.a., sp. nov. is proposed. The type strain is DMKU-SP85(T)( = BCC 69499(T) = CBS 13330(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Basidiomycota / classification*
  • Basidiomycota / genetics
  • Basidiomycota / isolation & purification
  • DNA, Fungal / genetics
  • DNA, Ribosomal Spacer / genetics
  • Genes, rRNA
  • Molecular Sequence Data
  • Mycological Typing Techniques
  • Oryza / microbiology*
  • Phylogeny*
  • Plant Leaves / microbiology
  • Saccharum / microbiology*
  • Sequence Analysis, DNA
  • Thailand

Substances

  • DNA, Fungal
  • DNA, Ribosomal Spacer

Associated data

  • GENBANK/AB863558
  • GENBANK/AB909023
  • GENBANK/AB915387
  • GENBANK/AB921216