Targeting hepatitis B virus cccDNA by CRISPR/Cas9 nuclease efficiently inhibits viral replication

Antiviral Res. 2015 Jun:118:110-7. doi: 10.1016/j.antiviral.2015.03.015. Epub 2015 Apr 3.

Abstract

Chronic hepatitis B virus (HBV) infection causes liver cirrhosis and hepatocellular carcinoma and remains a serious health problem worldwide. Covalently closed circular DNA (cccDNA) in the liver cell nucleus sustains HBV infection. Major treatments for HBV infection include the use of interferon-α and nucleotide analogs, but they cannot eradicate cccDNA. As a novel tool for genome editing, clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated protein 9 (Cas9) system developed from bacteria can be used to accurately and efficiently engineer and modify genomic DNA. In this study, the CRISPR/Cas9 system was used to target the HBV genome and efficiently inhibit HBV infection. We synthesized four single-guide RNAs (sgRNAs) targeting the conserved regions of HBV. The expression of these sgRNAS with Cas9 reduced the viral production in Huh7 cells as well as in HBV-replication cell HepG2.2.15. We further demonstrated that CRISPR/Cas9 direct cleavage and cleavage-mediated mutagenesis occurred in HBV cccDNA of transfected cells. In the new mouse model carrying HBV cccDNA, injection of sgRNA-Cas9 plasmids via rapid tail vein resulted in the low level of cccDNA and HBV protein. In conclusion, the designed CRISPR/Cas9 system can accurately and efficiently target HBV cccDNA and inhibit HBV replication. This system may be used as a novel therapeutic strategy against chronic HBV infection.

Keywords: CRISPR/Cas9; DNA targeting; HBV; Viral replication.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antiviral Agents / administration & dosage*
  • Antiviral Agents / metabolism
  • CRISPR-Associated Proteins / genetics
  • CRISPR-Associated Proteins / metabolism*
  • Cell Line
  • DNA, Circular / metabolism
  • DNA, Viral / metabolism
  • Disease Models, Animal
  • Drug Carriers / administration & dosage
  • Endonucleases / genetics
  • Endonucleases / metabolism*
  • Female
  • Hepatitis B virus / drug effects*
  • Hepatitis B virus / physiology
  • Hepatitis B, Chronic / drug therapy*
  • Hepatocytes / drug effects*
  • Hepatocytes / virology
  • Humans
  • Mice, Inbred BALB C
  • Plasmids / administration & dosage
  • Treatment Outcome
  • Virus Replication / drug effects*

Substances

  • Antiviral Agents
  • CRISPR-Associated Proteins
  • DNA, Circular
  • DNA, Viral
  • Drug Carriers
  • Endonucleases