Genome-wide transcriptional profiling reveals that HIV-1 Vpr differentially regulates interferon-stimulated genes in human monocyte-derived dendritic cells

Virus Res. 2015 Oct 2:208:156-63. doi: 10.1016/j.virusres.2015.06.017. Epub 2015 Jun 25.

Abstract

Dendritic cells (DCs) are potent antigen-presenting cells (APCs) that directly link the innate and adaptive immune responses. HIV-1 infection of DCs leads to a diverse array of changes in gene expression and play a major role in dissemination of the virus into T-cells. Although HIV-1 Vpr is a pleiotropic protein involved in HIV-1 replication and pathogenesis, its exact role in APCs such as DCs remains elusive. In this study, utilizing a microarray-based systemic biology approach, we found that HIV-1 Vpr differentially regulates (fold change >2.0) more than 200 genes, primarily those involved in the immune response and innate immune response including type I interferon signaling pathway. The differential expression profiles of select genes involved in innate immune responses (interferon-stimulated genes [ISGs]), including MX1, MX2, ISG15, ISG20, IFIT1, IFIT2, IFIT3, IFI27, IFI44L, and TNFSF10, were validated by real-time quantitative PCR; the results were consistent with the microarray data. Taken together, our findings are the first to demonstrate that HIV-1 Vpr induces ISGs and activates the type I IFN signaling pathway in human DCs, and provide insights into the role of Vpr in HIV-1 pathogenesis.

Keywords: HIV-1 Vpr; Immune response; Interferon stimulation genes (ISGs); Microarray; Monocyte-derived dendritic cells; Recombinant adenoviral vector; Type I interferon.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Dendritic Cells / cytology
  • Dendritic Cells / immunology*
  • Genome, Human
  • HIV Infections / genetics*
  • HIV Infections / immunology
  • HIV Infections / virology
  • HIV-1 / genetics
  • HIV-1 / metabolism*
  • Host-Pathogen Interactions
  • Humans
  • Immunity, Innate
  • Interferon Regulatory Factors / genetics*
  • Interferon Regulatory Factors / immunology
  • Monocytes / cytology
  • Monocytes / immunology*
  • vpr Gene Products, Human Immunodeficiency Virus / genetics
  • vpr Gene Products, Human Immunodeficiency Virus / metabolism*

Substances

  • Interferon Regulatory Factors
  • vpr Gene Products, Human Immunodeficiency Virus
  • vpr protein, Human immunodeficiency virus 1