Distinct oxidative cleavage and modification of bovine [Cu- Zn]-SOD by an ascorbic acid/Cu(II) system: Identification of novel copper binding site on SOD molecule

Free Radic Biol Med. 2016 May:94:161-73. doi: 10.1016/j.freeradbiomed.2016.01.020. Epub 2016 Feb 10.

Abstract

We investigated the combined effect of ascorbate and copper [Asc/Cu(II)] on the integrity of bovine [Cu-Zn]-superoxide dismutase (bSOD1) as a model system to study the metal catalyzed oxidation (MCO) and fragmentation of proteins. We found Asc/Cu(II) mediates specific cleavage of bSOD1 and generates 12.5 and 3.2kDa fragments in addition to oxidation/carbonylation of the protein. The effect of other tested transition metals, a metal chelator, and hydrogen peroxide on the cleavage and oxidation indicated that binding of copper to a previously unknown site on SOD1 is responsible for the Asc/Cu(II) specific cleavage and oxidation. We utilized tandem mass spectrometry to identify the specific cleavage sites of Asc/Cu(II)-treated bSOD1. Analyses of tryptic- and AspN-peptides have demonstrated the cleavage to occur at Gly31 with peptide bond breakage with Thr30 and Ser32 through diamide and α-amidation pathways, respectively. The three-dimensional structure of bSOD1 reveals the imidazole ring of His19 localized within 5Å from the α-carbon of Gly31 providing a structural basis that copper ion, most likely coordinated by His19, catalyzes the specific cleavage reaction.

Keywords: Ascorbic acid; Carbonylation; Copper; Mass spectrometry; Metal catalyzed oxidation; SOD.

MeSH terms

  • Animals
  • Ascorbic Acid / pharmacology
  • Binding Sites
  • Catalysis
  • Cattle
  • Copper / chemistry*
  • Copper / pharmacology
  • Hydrogen Peroxide / chemistry
  • Oxidation-Reduction*
  • Protein Binding
  • Protein Carbonylation
  • Protein Conformation*
  • Superoxide Dismutase-1 / chemistry*
  • Superoxide Dismutase-1 / metabolism

Substances

  • Copper
  • Hydrogen Peroxide
  • Superoxide Dismutase-1
  • Ascorbic Acid