Specific Inhibition of β-Secretase Processing of the Alzheimer Disease Amyloid Precursor Protein

Cell Rep. 2016 Mar 8;14(9):2127-2141. doi: 10.1016/j.celrep.2016.01.076. Epub 2016 Feb 25.

Abstract

Development of disease-modifying therapeutics is urgently needed for treating Alzheimer disease (AD). AD is characterized by toxic β-amyloid (Aβ) peptides produced by β- and γ-secretase-mediated cleavage of the amyloid precursor protein (APP). β-secretase inhibitors reduce Aβ levels, but mechanism-based side effects arise because they also inhibit β-cleavage of non-amyloid substrates like Neuregulin. We report that β-secretase has a higher affinity for Neuregulin than it does for APP. Kinetic studies demonstrate that the affinities and catalytic efficiencies of β-secretase are higher toward non-amyloid substrates than toward APP. We show that non-amyloid substrates are processed by β-secretase in an endocytosis-independent manner. Exploiting this compartmentalization of substrates, we specifically target the endosomal β-secretase by an endosomally targeted β-secretase inhibitor, which blocked cleavage of APP but not non-amyloid substrates in many cell systems, including induced pluripotent stem cell (iPSC)-derived neurons. β-secretase inhibitors can be designed to specifically inhibit the Alzheimer process, enhancing their potential as AD therapeutics without undesired side effects.

Keywords: APP; Alzheimer disease; BACE; Neuregulin; amyloid; membrane trafficking; molecular dynamics; secretase; subcellular compartmentalization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alzheimer Disease / drug therapy
  • Alzheimer Disease / enzymology*
  • Amyloid Precursor Protein Secretases / antagonists & inhibitors*
  • Amyloid Precursor Protein Secretases / chemistry
  • Amyloid Precursor Protein Secretases / metabolism
  • Amyloid beta-Protein Precursor / chemistry
  • Amyloid beta-Protein Precursor / metabolism*
  • Animals
  • Aspartic Acid Endopeptidases / chemistry
  • Aspartic Acid Endopeptidases / metabolism
  • Cells, Cultured
  • Endocytosis
  • Endosomes / metabolism
  • Golgi Apparatus / metabolism
  • Humans
  • Induced Pluripotent Stem Cells
  • Kinetics
  • Mice
  • Molecular Dynamics Simulation
  • Neuregulin-1 / chemistry
  • Neuregulin-1 / metabolism
  • Oligopeptides / chemistry
  • Oligopeptides / pharmacology*
  • Protein Processing, Post-Translational
  • Protein Transport
  • Proteolysis
  • Substrate Specificity

Substances

  • Amyloid beta-Protein Precursor
  • NRG1 protein, human
  • Neuregulin-1
  • OM99-2
  • Oligopeptides
  • Amyloid Precursor Protein Secretases
  • Aspartic Acid Endopeptidases
  • BACE1 protein, human