Characterization of the first double-stranded RNA bacteriophage infecting Pseudomonas aeruginosa

Sci Rep. 2016 Dec 9:6:38795. doi: 10.1038/srep38795.

Abstract

Bacteriophages (phages) are widely distributed in the biosphere and play a key role in modulating microbial ecology in the soil, ocean, and humans. Although the role of DNA bacteriophages is well described, the biology of RNA bacteriophages is poorly understood. More than 1900 phage genomes are currently deposited in NCBI, but only 6 dsRNA bacteriophages and 12 ssRNA bacteriophages genome sequences are reported. The 6 dsRNA bacteriophages were isolated from legume samples or lakes with Pseudomonas syringae as the host. Here, we report the first Pseudomonas aeruginosa phage phiYY with a three-segmented dsRNA genome. phiYY was isolated from hospital sewage in China with the clinical P. aeruginosa strain, PAO38, as a host. Moreover, the dsRNA phage phiYY has a broad host range, which infects 99 out of 233 clinical P. aeruginosa strains isolated from four provinces in China. This work presented a detailed characterization of the dsRNA bacteriophage infecting P. aeruginosa.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Bacteriophages / genetics
  • Bacteriophages / isolation & purification*
  • China
  • Cross Infection / microbiology
  • Genome, Viral
  • Host Specificity
  • Humans
  • Medical Waste
  • Open Reading Frames
  • Phylogeny
  • Pseudomonas Infections / microbiology
  • Pseudomonas aeruginosa / isolation & purification
  • Pseudomonas aeruginosa / virology*
  • RNA, Double-Stranded / isolation & purification
  • RNA, Viral / isolation & purification
  • Sewage / virology

Substances

  • Medical Waste
  • RNA, Double-Stranded
  • RNA, Viral
  • Sewage