Transcription-driven DNA methylation setting on the mouse Peg3 locus

Epigenetics. 2017;12(11):945-952. doi: 10.1080/15592294.2017.1377869. Epub 2017 Nov 10.

Abstract

The imprinting of the mouse Peg3 domain is controlled through the Peg3-DMR, which obtains its maternal-specific DNA methylation during oogenesis. In the current study, we deleted an oocyte-specific alternative promoter, termed U1, which is localized 20 kb upstream of the Peg3-DMR. Deletion of this alternative promoter resulted in complete removal of the maternal-specific DNA methylation on the Peg3-DMR. Consequently, the imprinted genes in the Peg3 domain become biallelic in the mutants with maternal transmission of the deletion. Expression levels of the imprinted genes were also affected in the mutants: 2-fold upregulation of Peg3 and Usp29 and downregulation of Zim1 to basal levels. Breeding experiments further indicated under-representation of females among the surviving mutants, a potential sex-biased outcome from the biallelic expression of the Peg3 domain. Overall, the results suggest that U1-driven transcription may be required for establishing oocyte-specific DNA methylation on the Peg3 domain.

Keywords: DNA methylation; Peg3; genomic imprinting; imprinting control region.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism
  • DNA Methylation*
  • DNA-Binding Proteins
  • Female
  • Genomic Imprinting*
  • Kruppel-Like Transcription Factors / genetics*
  • Male
  • Mice
  • Mutation
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / metabolism
  • Promoter Regions, Genetic*
  • Ubiquitin-Specific Proteases / genetics
  • Ubiquitin-Specific Proteases / metabolism

Substances

  • Carrier Proteins
  • DNA-Binding Proteins
  • Kruppel-Like Transcription Factors
  • Nerve Tissue Proteins
  • Peg3 protein, mouse
  • Zim1 protein, mouse
  • Ubiquitin-Specific Proteases
  • Usp29 protein, mouse