The Use of Translational Research Platforms in Clinical and Biomedical Data Exploration

Adv Exp Med Biol. 2017:988:301-311. doi: 10.1007/978-3-319-56246-9_25.

Abstract

The rise of precision medicine combined with the variety of biomedical data sources and their heterogeneous nature make the integration and exploration of information that they retain more complicated. In light of these issues, translational research platforms were developed as a promising solution. Research centers have used translational tools for the study of integrated data for hypothesis development and validation, cohort discovery and data-exploration. For this article, we reviewed the literature in order to determine the use of translational research platforms in precision medicine. These tools are used to support scientists in various domains regarding precision medicine research. We identified eight platforms: BRISK, iCOD, iDASH, tranSMART, the recently developed OncDRS, as well as caTRIP, cBio Cancer Portal and G-DOC. The last four platforms explore multidimensional data specifically for cancer research. We focused on tranSMART, for it is the most broadly used platform, since its development in 2012.

Keywords: Biomedical research; Clinical data; High-throughput technologies; Precision medicine; Translational research platforms.

Publication types

  • Review

MeSH terms

  • Biomedical Research*
  • Humans
  • Information Storage and Retrieval
  • Neoplasms
  • Precision Medicine*
  • Translational Research, Biomedical*