LAST, a c-Myc-inducible long noncoding RNA, cooperates with CNBP to promote CCND1 mRNA stability in human cells

Elife. 2017 Dec 4:6:e30433. doi: 10.7554/eLife.30433.

Abstract

Cyclin D1 is a critical regulator of cell cycle progression and works at the G1 to S-phase transition. Here, we report the isolation and characterization of the novel c-Myc-regulated lncRNA LAST (LncRNA-Assisted Stabilization of Transcripts), which acts as a CCND1 mRNA stabilizer. Mechanistically, LAST was shown to cooperate with CNBP to bind to the 5'UTR of CCND1 mRNA to protect against possible nuclease targeting. In addition, data from CNBP RIP-seq and LAST RNA-seq showed that CCND1 mRNA might not be the only target of LAST and CNBP; three additional mRNAs were shown to be post-transcriptional targets of LAST and CNBP. In a xenograft model, depletion of LAST diminished and ectopic expression of LAST induced tumor formation, which are suggestive of its oncogenic function. We thus report a previously unknown lncRNA involved in the fine-tuned regulation of CCND1 mRNA stability, without which CCND1 exhibits, at most, partial expression.

Keywords: CCND1; CNBP; E. coli; LAST; cancer biology; cell biology; human; mRNA stability.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cyclin D1 / genetics*
  • Gene Expression Regulation*
  • Humans
  • RNA Stability*
  • RNA, Long Noncoding / metabolism*
  • RNA-Binding Proteins / metabolism*

Substances

  • CCND1 protein, human
  • CNBP protein, human
  • RNA, Long Noncoding
  • RNA-Binding Proteins
  • Cyclin D1

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.