A Novel Deltaflexivirus that Infects the Plant Fungal Pathogen, Sclerotinia sclerotiorum, Can Be Transmitted Among Host Vegetative Incompatible Strains

Viruses. 2018 May 31;10(6):295. doi: 10.3390/v10060295.

Abstract

Various mycoviruses have been isolated from Sclerotinia sclerotiorum. Here, we identified a viral RNA sequence contig, representing a novel virus, Sclerotinia sclerotiorum deltaflexivirus 2 (SsDFV2), from an RNA_Seq database. We found that SsDFV2 was harbored in the hypovirulent strain, 228, which grew slowly on potato dextrose agar, produced a few sclerotia, and could not induce typical lesions on detached rapeseed (Brassica napus) leaves. Strain 228 was also infected by Botrytis porri RNA Virus 1 (BpRV1), a virus originally isolated from Botrytis porri. The genome of SsDFV2 comprised 6711 nucleotides, excluding the poly (A) tail, and contained a single large predicted open reading frame encoding a putative viral RNA replicase. Phylogenetic analysis demonstrated that SsDFV2 is closely related to viruses in the family Deltaflexiviridae; however, it also differs significantly from members of this family, suggesting that it may represent a new species. Further we determined that SsDFV2 could be efficiently transmitted to host vegetative incompatible individuals by dual culture. To our best knowledge, this is the first report that a (+) ssRNA mycovirus can overcome the transmission limitations of the vegetative incompatibility system, a phenomenon that may facilitate the potential use of mycoviruses for the control of crop fungal diseases.

Keywords: Brassica napus; Sclerotinia sclerotiorum; deltaflexivirus; transmission; vegetative incompatibility.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ascomycota / pathogenicity
  • Ascomycota / virology*
  • Brassica napus / microbiology
  • Fungal Viruses / classification*
  • Fungal Viruses / isolation & purification
  • Genome, Viral
  • Open Reading Frames
  • Phylogeny
  • Plant Diseases / microbiology*
  • Plant Diseases / prevention & control
  • RNA Viruses / classification
  • RNA Viruses / isolation & purification
  • RNA, Viral / genetics
  • RNA, Viral / isolation & purification
  • Sequence Analysis, DNA
  • Virulence

Substances

  • RNA, Viral